I can't reproduce this. If etckeeper unclean returns correctly (and from
your description, it does) everything should work...
Can you reproduce it or was it a transient error ? There could be some
condition if some file in /etc was deleted between the calls to
etckeeper unclean and etckeeper commit...
** Changed in: etckeeper (Ubuntu)
Status: New => Incomplete
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bzr: ERROR: no changes to commit.
https://bugs.launchpad.net/bugs/344492
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