I can see that libsodium had the same build break problem with
autoconf-2.69 and the compatibility patch for 2.63 was reverted. This
is the problem here as well. We could revert this change and verify if
crosscompilation still works.
https://github.com/jedisct1/libsodium/pull/216

In UrJTAG I got rid of this problem by removing following lines from
acinclude.m4:

152 dnl AS_VAR_APPEND
153 dnl -------------
154 dnl
155 dnl this was added in autoconf-2.64+
156 dnl
157 m4_ifndef([AS_VAR_APPEND],[dnl
158 AC_DEFUN([AS_VAR_APPEND], [$1=$$1$2])
159 ])dnl

iCeDeROM:urjtag cederom$ autoconf --version
autoconf (GNU Autoconf) 2.69
Copyright (C) 2012 Free Software Foundation, Inc.
License GPLv3+/Autoconf: GNU GPL version 3 or later
<http://gnu.org/licenses/gpl.html>, <http://gnu.org/licenses/exceptions.html>
This is free software: you are free to change and redistribute it.
There is NO WARRANTY, to the extent permitted by law.

Written by David J. MacKenzie and Akim Demaille.

iCeDeROM:urjtag cederom$ uname -a
Darwin iCeDeROM.local 16.4.0 Darwin Kernel Version 16.4.0: Thu Dec 22
22:53:21 PST 2016; root:xnu-3789.41.3~3/RELEASE_X86_64 x86_64

iCeDeROM:urjtag cederom$ port -v
MacPorts 2.4.1

-- 
CeDeROM, SQ7MHZ, http://www.tomek.cedro.info

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