On Dec 14, 2010, at 18:45, Nate McCall wrote: > Timo, > Apologies if I missed it above, but how big is the batch size you are > sending to batch_mutate?
Actually only a single row at a time for now (hector 0.7-21): final Cluster cluster = HFactory.getOrCreateCluster("Test", cassandraHostConfigurator); final Keyspace ks = HFactory.createKeyspace("test", cluster); final Mutator<String> mutator = HFactory.createMutator(ks, StringSerializer.get()); mutator.addInsertion(id, "tracking", HFactory.createStringColumn("key", name)) .addInsertion(id, "tracking", HFactory.createStringColumn("value", value)) .execute(); Thinking of CASSANDRA-475 (this was also OOM, IIRC), is it possibly a hector/thrift bug? > On Tue, Dec 14, 2010 at 9:15 AM, Timo Nentwig <timo.nent...@toptarif.de> > wrote: >> On Dec 14, 2010, at 15:31, Timo Nentwig wrote: >> >>> On Dec 14, 2010, at 14:41, Jonathan Ellis wrote: >>> >>>> This is "A row has grown too large" section from that troubleshooting >>>> guide. >>> >>> Why? This is what a typical "row" (?) looks like: >>> >>> [defa...@test] list tracking limit 1; >>> ------------------- >>> RowKey: 123 >>> => (column=key, value=foo, timestamp=1292238005886000) >>> => (column=value, value=bar, timestamp=1292238005886000) >>> >>> I'm importing the data from a RDBMS so I can say for sure that none of the >>> 2 columns will contain more than 255 chars. >> >> Started all over again. Deleleted /var/lib/cassandra/*, started 4 nodes >> (2x2G+2x1G heap, actual RAM twice as much, swap off) and my stress test: >> first node (1GB) crashed after 212s (!). Wrote roughly about 200k rows like >> the one above (data wasn't even flushed to disk!). >> >> INFO [main] 2010-12-14 15:58:23,938 CassandraDaemon.java (line 119) >> Listening for thrift clients... >> INFO [GossipStage:1] 2010-12-14 15:58:24,410 Gossiper.java (line 569) >> InetAddress /192.168.68.80 is now UP >> INFO [HintedHandoff:1] 2010-12-14 15:58:24,410 HintedHandOffManager.java >> (line 191) Started hinted handoff for endpoint /192.168.68.80 >> INFO [HintedHandoff:1] 2010-12-14 15:58:24,412 HintedHandOffManager.java >> (line 247) Finished hinted handoff of 0 rows to endpoint /192.168.68.80 >> INFO [GossipStage:1] 2010-12-14 15:58:26,335 Gossiper.java (line 577) Node >> /192.168.68.69 is now part of the cluster >> INFO [GossipStage:1] 2010-12-14 15:58:27,319 Gossiper.java (line 569) >> InetAddress /192.168.68.69 is now UP >> INFO [HintedHandoff:1] 2010-12-14 15:58:27,319 HintedHandOffManager.java >> (line 191) Started hinted handoff for endpoint /192.168.68.69 >> INFO [HintedHandoff:1] 2010-12-14 15:58:27,320 HintedHandOffManager.java >> (line 247) Finished hinted handoff of 0 rows to endpoint /192.168.68.69 >> INFO [GossipStage:1] 2010-12-14 15:58:29,446 Gossiper.java (line 577) Node >> /192.168.68.70 is now part of the cluster >> INFO [GossipStage:1] 2010-12-14 15:58:29,620 Gossiper.java (line 569) >> InetAddress /192.168.68.70 is now UP >> INFO [HintedHandoff:1] 2010-12-14 15:58:29,621 HintedHandOffManager.java >> (line 191) Started hinted handoff for endpoint /192.168.68.70 >> INFO [HintedHandoff:1] 2010-12-14 15:58:29,621 HintedHandOffManager.java >> (line 247) Finished hinted handoff of 0 rows to endpoint /192.168.68.70 >> INFO [MigrationStage:1] 2010-12-14 16:01:16,535 ColumnFamilyStore.java >> (line 639) switching in a fresh Memtable for Migrations at >> CommitLogContext(file='/var/lib/cassandra/commitlog/CommitLog-1292338703483.log', >> position=15059) >> INFO [MigrationStage:1] 2010-12-14 16:01:16,536 ColumnFamilyStore.java >> (line 943) Enqueuing flush of memtable-migrati...@768974140(9092 bytes, 1 >> operations) >> INFO [MigrationStage:1] 2010-12-14 16:01:16,536 ColumnFamilyStore.java >> (line 639) switching in a fresh Memtable for Schema at >> CommitLogContext(file='/var/lib/cassandra/commitlog/CommitLog-1292338703483.log', >> position=15059) >> INFO [MigrationStage:1] 2010-12-14 16:01:16,536 ColumnFamilyStore.java >> (line 943) Enqueuing flush of memtable-sch...@591783334(3765 bytes, 3 >> operations) >> INFO [FlushWriter:1] 2010-12-14 16:01:16,541 Memtable.java (line 155) >> Writing memtable-migrati...@768974140(9092 bytes, 1 operations) >> INFO [FlushWriter:1] 2010-12-14 16:01:16,633 Memtable.java (line 162) >> Completed flushing /var/lib/cassandra/data/system/Migrations-e-1-Data.db >> (9225 bytes) >> INFO [FlushWriter:1] 2010-12-14 16:01:16,634 Memtable.java (line 155) >> Writing memtable-sch...@591783334(3765 bytes, 3 operations) >> INFO [FlushWriter:1] 2010-12-14 16:01:16,706 Memtable.java (line 162) >> Completed flushing /var/lib/cassandra/data/system/Schema-e-1-Data.db (4053 >> bytes) >> INFO [Create index Indexed1.626972746864617465] 2010-12-14 16:01:16,718 >> ColumnFamilyStore.java (line 325) Creating index >> org.apache.cassandra.db.ta...@354d581b.indexed1.626972746864617465 >> INFO [MigrationStage:1] 2010-12-14 16:01:16,725 ColumnFamilyStore.java >> (line 639) switching in a fresh Memtable for Migrations at >> CommitLogContext(file='/var/lib/cassandra/commitlog/CommitLog-1292338703483.log', >> position=27559) >> INFO [MigrationStage:1] 2010-12-14 16:01:16,726 ColumnFamilyStore.java >> (line 943) Enqueuing flush of memtable-migrati...@1922556837(7973 bytes, 1 >> operations) >> INFO [Create index Indexed1.626972746864617465] 2010-12-14 16:01:16,729 >> ColumnFamilyStore.java (line 339) Index Indexed1.626972746864617465 complete >> INFO [MigrationStage:1] 2010-12-14 16:01:16,730 ColumnFamilyStore.java >> (line 639) switching in a fresh Memtable for Schema at >> CommitLogContext(file='/var/lib/cassandra/commitlog/CommitLog-1292338703483.log', >> position=27559) >> INFO [FlushWriter:1] 2010-12-14 16:01:16,730 Memtable.java (line 155) >> Writing memtable-migrati...@1922556837(7973 bytes, 1 operations) >> INFO [MigrationStage:1] 2010-12-14 16:01:16,730 ColumnFamilyStore.java >> (line 943) Enqueuing flush of memtable-sch...@1373806697(4029 bytes, 4 >> operations) >> INFO [Create index Indexed1.626972746864617465] 2010-12-14 16:01:16,733 >> ColumnFamilyStore.java (line 639) switching in a fresh Memtable for >> IndexInfo at >> CommitLogContext(file='/var/lib/cassandra/commitlog/CommitLog-1292338703483.log', >> position=27707) >> INFO [Create index Indexed1.626972746864617465] 2010-12-14 16:01:16,734 >> ColumnFamilyStore.java (line 943) Enqueuing flush of >> memtable-indexi...@1972467582(42 bytes, 1 operations) >> INFO [FlushWriter:1] 2010-12-14 16:01:16,808 Memtable.java (line 162) >> Completed flushing /var/lib/cassandra/data/system/Migrations-e-2-Data.db >> (8106 bytes) >> INFO [FlushWriter:1] 2010-12-14 16:01:16,816 Memtable.java (line 155) >> Writing memtable-sch...@1373806697(4029 bytes, 4 operations) >> INFO [FlushWriter:1] 2010-12-14 16:01:16,902 Memtable.java (line 162) >> Completed flushing /var/lib/cassandra/data/system/Schema-e-2-Data.db (4317 >> bytes) >> INFO [FlushWriter:1] 2010-12-14 16:01:16,904 Memtable.java (line 155) >> Writing memtable-indexi...@1972467582(42 bytes, 1 operations) >> INFO [FlushWriter:1] 2010-12-14 16:01:16,968 Memtable.java (line 162) >> Completed flushing /var/lib/cassandra/data/system/IndexInfo-e-1-Data.db (170 >> bytes) >> ERROR [MutationStage:22] 2010-12-14 16:02:00,283 >> AbstractCassandraDaemon.java (line 90) Fatal exception in thread >> Thread[MutationStage:22,5,main] >> java.lang.OutOfMemoryError: Java heap space >> at java.nio.HeapByteBuffer.<init>(HeapByteBuffer.java:39) >> at java.nio.ByteBuffer.allocate(ByteBuffer.java:312) >> at >> org.apache.cassandra.utils.FBUtilities.readByteArray(FBUtilities.java:261) >> at >> org.apache.cassandra.db.ColumnSerializer.deserialize(ColumnSerializer.java:76) >> at >> org.apache.cassandra.db.ColumnSerializer.deserialize(ColumnSerializer.java:35) >> at >> org.apache.cassandra.db.ColumnFamilySerializer.deserializeColumns(ColumnFamilySerializer.java:129) >> at >> org.apache.cassandra.db.ColumnFamilySerializer.deserialize(ColumnFamilySerializer.java:120) >> at >> org.apache.cassandra.db.RowMutationSerializer.defreezeTheMaps(RowMutation.java:383) >> at >> org.apache.cassandra.db.RowMutationSerializer.deserialize(RowMutation.java:393) >> at >> org.apache.cassandra.db.RowMutationSerializer.deserialize(RowMutation.java:351) >> at >> org.apache.cassandra.db.RowMutationVerbHandler.doVerb(RowMutationVerbHandler.java:52) >> at >> org.apache.cassandra.net.MessageDeliveryTask.run(MessageDeliveryTask.java:63) >> at >> java.util.concurrent.ThreadPoolExecutor$Worker.runTask(ThreadPoolExecutor.java:886) >> at >> java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:908) >> at java.lang.Thread.run(Thread.java:662) >> >> gc: >> >> 210.919: [GC 210.919: [ParNew >> Desired survivor size 2162688 bytes, new threshold 1 (max 1) >> - age 1: 1833480 bytes, 1833480 total >> : 16139K->4221K(38336K), 0.0377710 secs]210.957: [CMS: >> 690490K->171727K(1006016K), 1.0604710 secs] 702251K->171727K(1044352K), [CMS >> Perm : 17750K->17734K(21248K)], 1.0985490 secs] [Times: user=1.11 sys=0.01, >> real=1.10 secs] >> 212.017: [Full GC 212.017: [CMS: 171727K->171315K(1006016K), 1.0312260 secs] >> 171727K->171315K(1044352K), [CMS Perm : 17734K->17504K(29560K)], 1.0314660 >> secs] [Times: user=1.03 sys=0.00, real=1.03 secs] >> Total time for which application threads were stopped: 2.1309030 seconds >> Total time for which application threads were stopped: 4.4463770 seconds >> Heap >> par new generation total 38336K, used 15546K [0x00000000bae00000, >> 0x00000000bd790000, 0x00000000bd790000) >> eden space 34112K, 45% used [0x00000000bae00000, 0x00000000bbd2ebb8, >> 0x00000000bcf50000) >> from space 4224K, 0% used [0x00000000bd370000, 0x00000000bd370000, >> 0x00000000bd790000) >> to space 4224K, 0% used [0x00000000bcf50000, 0x00000000bcf50000, >> 0x00000000bd370000) >> concurrent mark-sweep generation total 1006016K, used 171315K >> [0x00000000bd790000, 0x00000000fae00000, 0x00000000fae00000) >> concurrent-mark-sweep perm gen total 29560K, used 17572K >> [0x00000000fae00000, 0x00000000fcade000, 0x0000000100000000) >> >> >> During this short time I experienced 4 times (mentioned this already on the >> dev list): >> >> me.prettyprint.hector.api.exceptions.HCassandraInternalException: Cassandra >> encountered an internal error processing this request: TApplicationError >> type: 6 message:Internal error processing batch_mutate >> at >> me.prettyprint.cassandra.service.ExceptionsTranslatorImpl.translate(ExceptionsTranslatorImpl.java:27) >> at >> me.prettyprint.cassandra.service.KeyspaceServiceImpl$1.execute(KeyspaceServiceImpl.java:95) >> at >> me.prettyprint.cassandra.service.KeyspaceServiceImpl$1.execute(KeyspaceServiceImpl.java:1) >> at >> me.prettyprint.cassandra.service.Operation.executeAndSetResult(Operation.java:89) >> at >> me.prettyprint.cassandra.connection.HConnectionManager.operateWithFailover(HConnectionManager.java:142) >> at >> me.prettyprint.cassandra.service.KeyspaceServiceImpl.operateWithFailover(KeyspaceServiceImpl.java:129) >> at >> me.prettyprint.cassandra.service.KeyspaceServiceImpl.batchMutate(KeyspaceServiceImpl.java:100) >> at >> me.prettyprint.cassandra.service.KeyspaceServiceImpl.batchMutate(KeyspaceServiceImpl.java:106) >> at >> me.prettyprint.cassandra.model.MutatorImpl$2.doInKeyspace(MutatorImpl.java:149) >> at >> me.prettyprint.cassandra.model.MutatorImpl$2.doInKeyspace(MutatorImpl.java:1) >> at >> me.prettyprint.cassandra.model.KeyspaceOperationCallback.doInKeyspaceAndMeasure(KeyspaceOperationCallback.java:20) >> at >> me.prettyprint.cassandra.model.ExecutingKeyspace.doExecute(ExecutingKeyspace.java:65) >> at >> me.prettyprint.cassandra.model.MutatorImpl.execute(MutatorImpl.java:146) >> at Trackr$3.run(Trackr.java:133) >> at Trackr$BoundedExecutor$1.run(Trackr.java:167) >> at >> java.util.concurrent.ThreadPoolExecutor$Worker.runTask(ThreadPoolExecutor.java:886) >> at >> java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:908) >> at java.lang.Thread.run(Thread.java:680) >> >>> That row warning seems to be a 0.6 option, don't find it in 0.7 docs. >>> Didn't find any related WARNs for some default value in the log also. >>> >>>> On Tue, Dec 14, 2010 at 5:27 AM, Timo Nentwig <timo.nent...@toptarif.de> >>>> wrote: >>>> >>>> On Dec 12, 2010, at 17:21, Jonathan Ellis wrote: >>>> >>>>> http://www.riptano.com/docs/0.6/troubleshooting/index#nodes-are-dying-with-oom-errors >>>> >>>> I can rule out the first 3. I was running cassandra with default settings, >>>> i.e. 1GB heap and 256M memtable. So, with 3 memtables+1GB the JVM should >>>> run with >1.75G (although >>>> http://wiki.apache.org/cassandra/MemtableThresholds considers to increase >>>> heap size only gently). Did so. 4GB machine with 2GB 64bit-JVM seemed to >>>> run stable for quite some time but then also crashed with OOM. Looking at >>>> the heap dump it's always the same: all memory nearly always bound in >>>> CompactionExecutor (ColumnFamilyStore/ConcurrentSkipListMap, respectively). >>>> >>>> This looks like somebody else recently have had a similar problem >>>> (->Bottom line: more heap - which is okay, but I'd like to understand why): >>>> http://www.mail-archive.com/user@cassandra.apache.org/msg07516.html >>>> >>>> This is my only CF currently in use (via JMX): >>>> >>>> - column_families: >>>> - column_type: Standard >>>> comment: tracking column family >>>> compare_with: org.apache.cassandra.db.marshal.UTF8Type >>>> default_validation_class: org.apache.cassandra.db.marshal.UTF8Type >>>> gc_grace_seconds: 864000 >>>> key_cache_save_period_in_seconds: 3600 >>>> keys_cached: 200000.0 >>>> max_compaction_threshold: 32 >>>> memtable_flush_after_mins: 60 >>>> min_compaction_threshold: 4 >>>> name: tracking >>>> read_repair_chance: 1.0 >>>> row_cache_save_period_in_seconds: 0 >>>> rows_cached: 0.0 >>>> name: test >>>> replica_placement_strategy: org.apache.cassandra.locator.SimpleStrategy >>>> replication_factor: 3 >>>> >>>> >>>> In addition...actually there is plenty of free memory on the heap (?): >>>> >>>> 3605.478: [GC 3605.478: [ParNew >>>> Desired survivor size 2162688 bytes, new threshold 1 (max 1) >>>> - age 1: 416112 bytes, 416112 total >>>> : 16887K->553K(38336K), 0.0209550 secs]3605.499: [CMS: >>>> 1145267K->447565K(2054592K), 1.9143630 secs] 1161938K->447565K(2092928K), >>>> [CMS Perm : 18186K->18158K(30472K)], 1.9355340 secs] [Times: user=1.95 >>>> sys=0.00, real=1.94 secs] >>>> 3607.414: [Full GC 3607.414: [CMS: 447565K->447453K(2054592K), 1.9694960 >>>> secs] 447565K->447453K(2092928K), [CMS Perm : 18158K->18025K(30472K)], >>>> 1.9696450 secs] [Times: user=1.92 sys=0.00, real=1.97 secs] >>>> Total time for which application threads were stopped: 3.9070380 seconds >>>> Total time for which application threads were stopped: 7.3388640 seconds >>>> Total time for which application threads were stopped: 0.0560610 seconds >>>> 3616.931: [GC 3616.931: [ParNew >>>> Desired survivor size 2162688 bytes, new threshold 1 (max 1) >>>> - age 1: 474264 bytes, 474264 total >>>> : 34112K->747K(38336K), 0.0098680 secs] 481565K->448201K(2092928K), >>>> 0.0099690 secs] [Times: user=0.00 sys=0.00, real=0.01 secs] >>>> Total time for which application threads were stopped: 0.0108670 seconds >>>> 3617.035: [GC 3617.035: [ParNew >>>> Desired survivor size 2162688 bytes, new threshold 1 (max 1) >>>> - age 1: 63040 bytes, 63040 total >>>> : 34859K->440K(38336K), 0.0065950 secs] 482313K->448455K(2092928K), >>>> 0.0066880 secs] [Times: user=0.00 sys=0.00, real=0.00 secs] >>>> Total time for which application threads were stopped: 0.0075850 seconds >>>> 3617.133: [GC 3617.133: [ParNew >>>> Desired survivor size 2162688 bytes, new threshold 1 (max 1) >>>> - age 1: 23016 bytes, 23016 total >>>> : 34552K->121K(38336K), 0.0042920 secs] 482567K->448193K(2092928K), >>>> 0.0043650 secs] [Times: user=0.01 sys=0.00, real=0.00 secs] >>>> Total time for which application threads were stopped: 0.0049630 seconds >>>> 3617.228: [GC 3617.228: [ParNew >>>> Desired survivor size 2162688 bytes, new threshold 1 (max 1) >>>> - age 1: 16992 bytes, 16992 total >>>> : 34233K->34K(38336K), 0.0043180 secs] 482305K->448122K(2092928K), >>>> 0.0043910 secs] [Times: user=0.00 sys=0.00, real=0.00 secs] >>>> Total time for which application threads were stopped: 0.0049150 seconds >>>> 3617.323: [GC 3617.323: [ParNew >>>> Desired survivor size 2162688 bytes, new threshold 1 (max 1) >>>> - age 1: 18456 bytes, 18456 total >>>> : 34146K->29K(38336K), 0.0038930 secs] 482234K->448127K(2092928K), >>>> 0.0039810 secs] [Times: user=0.00 sys=0.00, real=0.00 secs] >>>> Total time for which application threads were stopped: 0.0055390 seconds >>>> Heap >>>> par new generation total 38336K, used 17865K [0x000000077ae00000, >>>> 0x000000077d790000, 0x000000077d790000) >>>> eden space 34112K, 52% used [0x000000077ae00000, 0x000000077bf6afb0, >>>> 0x000000077cf50000) >>>> from space 4224K, 0% used [0x000000077cf50000, 0x000000077cf57720, >>>> 0x000000077d370000) >>>> to space 4224K, 0% used [0x000000077d370000, 0x000000077d370000, >>>> 0x000000077d790000) >>>> concurrent mark-sweep generation total 2054592K, used 448097K >>>> [0x000000077d790000, 0x00000007fae00000, 0x00000007fae00000) >>>> concurrent-mark-sweep perm gen total 30472K, used 18125K >>>> [0x00000007fae00000, 0x00000007fcbc2000, 0x0000000800000000) >>>> >>>>> >>>>> On Sun, Dec 12, 2010 at 9:52 AM, Timo Nentwig <timo.nent...@toptarif.de> >>>>> wrote: >>>>> >>>>> On Dec 10, 2010, at 19:37, Peter Schuller wrote: >>>>> >>>>>> To cargo cult it: Are you running a modern JVM? (Not e.g. openjdk b17 >>>>>> in lenny or some such.) If it is a JVM issue, ensuring you're using a >>>>>> reasonably recent JVM is probably much easier than to start tracking >>>>>> it down... >>>>> >>>>> I had OOM problems with OpenJDK, switched to Sun/Oracle's recent 1.6.0_23 >>>>> and...still have the same problem :-\ Stack trace always looks the same: >>>>> >>>>> java.lang.OutOfMemoryError: Java heap space >>>>> at java.nio.HeapByteBuffer.<init>(HeapByteBuffer.java:57) >>>>> at java.nio.ByteBuffer.allocate(ByteBuffer.java:329) >>>>> at >>>>> org.apache.cassandra.utils.FBUtilities.readByteArray(FBUtilities.java:261) >>>>> at >>>>> org.apache.cassandra.db.ColumnSerializer.deserialize(ColumnSerializer.java:76) >>>>> at >>>>> org.apache.cassandra.db.ColumnSerializer.deserialize(ColumnSerializer.java:35) >>>>> at >>>>> org.apache.cassandra.db.ColumnFamilySerializer.deserializeColumns(ColumnFamilySerializer.java:129) >>>>> at >>>>> org.apache.cassandra.db.ColumnFamilySerializer.deserialize(ColumnFamilySerializer.java:120) >>>>> at >>>>> org.apache.cassandra.db.RowMutationSerializer.defreezeTheMaps(RowMutation.java:383) >>>>> at >>>>> org.apache.cassandra.db.RowMutationSerializer.deserialize(RowMutation.java:393) >>>>> at >>>>> org.apache.cassandra.db.RowMutationSerializer.deserialize(RowMutation.java:351) >>>>> at >>>>> org.apache.cassandra.db.RowMutationVerbHandler.doVerb(RowMutationVerbHandler.java:52) >>>>> at >>>>> org.apache.cassandra.net.MessageDeliveryTask.run(MessageDeliveryTask.java:63) >>>>> at >>>>> java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1110) >>>>> at >>>>> java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:603) >>>>> at java.lang.Thread.run(Thread.java:636) >>>>> >>>>> I'm writing from 1 client with 50 threads to a cluster of 4 machines >>>>> (with hector). With QUORUM and ONE 2 machines quite reliably will soon >>>>> die with OOM. What may cause this? Won't cassandra block/reject when >>>>> memtable is full and being flushed to disk but grow and if flushing to >>>>> disk isn't fast enough will run out of memory? >>>>> >>>>> >>>>> >>>>> -- >>>>> Jonathan Ellis >>>>> Project Chair, Apache Cassandra >>>>> co-founder of Riptano, the source for professional Cassandra support >>>>> http://riptano.com >>>> >>>> >>>> >>>> >>>> -- >>>> Jonathan Ellis >>>> Project Chair, Apache Cassandra >>>> co-founder of Riptano, the source for professional Cassandra support >>>> http://riptano.com >>> >> >>