Hi Pei, Thanks for your time!
Sort of this is what I am looking for. I will do some research on javadoc to see what I could do with the API. May I ask you one more question? Isn't ctakes build to accommodate these types of requirements (like integrating with other application)? Am I missing something important? The reason is, I would need to read the out put of ctakes and perform some other analysis using WEKA. If ctakes is not yet ready for these types of requirements I may need to go back re-evaluate the software stack. Thank you, Giri On Tue, Apr 2, 2013 at 10:20 AM, Chen, Pei <[email protected]>wrote: > Hi Giri,**** > > I presume, essentially, you’re planning to include the cTAKES lib(s) (via > mvn?) into your existing app**** > > **1) **Programmatically configure the pipeline**** > > **2) **Pass in a document(s) to cTAKES for processing**** > > **3) **Do XYZ with the output from the jCAS using the UIMA API’s > (such as writing to disk or saving it to a db)**** > > It is not quite prime time ready but, take a look peek at the below (It > uses uimaFIT to do the above):**** > > > http://svn.apache.org/repos/asf/ctakes/sandbox/ctakes-gui/src/main/java/org/chboston/cnlp/ctakes/gui/service/LauncherService.java > **** > > ** ** > > Essentially, it boils down to a few lines of code:**** > > AnalysisEngine aggregateAE = AnalysisEngineFactory.createAggregate(**** > > engines, componentNames, typeSystemDescription, null,**** > > new SofaMapping[0]);**** > > **** > > JCas jcas = aggregateAE.newJCas();**** > > jcas.setDocumentText(doc.getText());**** > > aggregateAE.process(jcas);**** > > ** ** > > ** ** > > *From:* giri vara prasad nambari [mailto:[email protected]] > *Sent:* Tuesday, April 02, 2013 10:04 AM > *To:* [email protected] > *Subject:* Re: cTakes with java web application**** > > ** ** > > Hi Pei,**** > > **** > > Thanks for your time on answering this.**** > > **** > > Actually I am not looking for pre built web application (or) GUI. I was > expecting something like "include ctakes jars in my web application ((or) > even for the matter any client java program)" and start using ctakes API. > Is this possible with ctakes api? If so, any sample ctakes client code > available?**** > > **** > > I am not moving towards any SOA (or) pre-built GUI.**** > > **** > > **** > > I would be happy to contribute to GUI, but first I need to finish this > ctakes integration task into my web application ASAP.**** > > **** > > I hope this time my question is more clear.**** > > **** > > Thank you,**** > > Giri**** > > On Tue, Apr 2, 2013 at 9:51 AM, Chen, Pei <[email protected]> > wrote:**** > > Hi Giri,**** > > Apache cTAKES is mainly in Java built on top of the UIMA Framework.**** > > Currently, there isn’t out of the box web application with cTAKES, however > there is a GUI currently in the sandbox area but isn’t quite ready for > prime time yet. Is this something that you might be interested in > contributing to?**** > > http://svn.apache.org/repos/asf/ctakes/sandbox/ctakes-gui/**** > > **** > > There are also some UIMA options that may point you in the right direction. > **** > > UIMA-AS (If you’re gearing towards a Service Architecture for your web > app.)**** > > http://uima.apache.org/d/uima-as-2.4.0/uima_async_scaleout.html**** > > **** > > There is also a Simple Rest service (but runs in-process):**** > > UIMA Simple Server**** > > http://uima.apache.org/sandbox.html#simple-server**** > > **** > > Thanks,**** > > Pei**** > > **** > > *From:* giri vara prasad nambari [mailto:[email protected]] > *Sent:* Tuesday, April 02, 2013 12:29 AM > *To:* [email protected] > *Subject:* Fwd: cTakes with java web application**** > > **** > > **** > > Hi Community,**** > > **** > > I did lot of google for sample java code to integrate cTakes into web > application, can some one please point me in right direction.**** > > **** > > I would like to use clinical pipeline with plain text instead of XML > documents.**** > > **** > > Any help would be appreciated.**** > > **** > > Thank you,**** > > Giri**** > > **** > > **** > > ** ** >
