going well thanks :)
On Thursday, November 14, 2013 4:15:56 PM, digital paula <[email protected]> wrote: I added the full path for the TypeSystem to the CdaCasInitializer descriptor (the only primitive AE in the AggregateAE) and it works now like a charm. Thanks James! Also, thanks to Samir for responding....how's it going old friend? :-) > From: [email protected] > To: [email protected] > Subject: RE: cTakes Document Preprocessor Component Error > Date: Thu, 14 Nov 2013 20:37:47 +0000 > > Try adding > > org.apache.ctakes.typesystem.types.TypeSystem > > as the type system. > > So the source looks like: > > <typeSystemDescription> > <imports> > <import name="org.apache.ctakes.typesystem.types.TypeSystem"/> > </imports> > </typeSystemDescription> > > Hope that helps > -- James > > > From: [email protected] > [mailto:[email protected]] On Behalf Of > digital paula > Sent: Thursday, November 14, 2013 1:42 PM > To: [email protected] > Subject: cTakes Document Preprocessor Component Error > > Hello cTakes Community, > > I'm back after hanging out with the UIMA guys :-) for a while, getting a > better grasp of the UIMA framework that cTakes sits on. I'm exploring and > understanding cTakes components and starting with the Document Preprocessor: > https://cwiki.apache.org/confluence/display/CTAKES/cTAKES+3.0+-+Document+Preprocessor > > I loaded the testpatient_cn_1.xml file in the CVD cTakes launcher and loaded > the AggregateAE descriptor. It loaded but when I ran it, I got the > following error: > > Caused by: org.apache.uima.cas.CASRuntimeException: JCas type > "org.apache.ctakes.typesystem.type.textspan.Segment" used in Java code, but > was not declared in the XML type descriptor. > > I looked in the AggregatorAE descriptor file along with it's dependency > CdaCasInitializer.xml and see both have nothing in the Type System tab > however I do see a handful of types specified on the Capabilities tab > including "org.apache.ctakes.typesystem.type.textspan.Segment" > > So I added Segment type to the Type System tab. I reran and got this error: > > 11/14/13 2:23:39 PM - 14: > org.apache.uima.tools.cvd.MainFrame.handleException(527): SEVERE: Feature > "id" is not defined for type > "org.apache.ctakes.typesystem.type.textspan.Segment". > org.apache.uima.analysis_engine.AnalysisEngineProcessException: Feature "id" > is not defined for type "org.apache.ctakes.typesystem.type.textspan.Segment". > Is there a file descriptor already setup maybe in another install with the > necessary types/features to run the Document Preprocessor or will I manually > have to add all of them? If not, I'd like to use UIMAfit to create the > types/features to use with the Document Preprocessor as opposed to manually > updating this descriptor with all the types and features needed. Can > someone advise? > > Thanks. > > Regards, > Paula > > > > >
