Hi, I wonder how to use cTAKES from the command line.
E.g. : - I have a file note.txt that contains some text like "Patient had elevated blood sugar but tests confirm no diabetes. Patient's father had adult onset diabetes." - I want to use the provided analysis engine "\apache-ctakes-3.2.2-bin\apache-ctakes-3.2.2\desc\ctakes-clinical-pipeline\desc\analysis_engine\AggregatePlaintextUMLSProcessor.xml" How can I get the analyse engine's output (viz. the annotations) using the command line (i.e. without using graphical user interfaces such as UIMA CAS Visual Debugger or the Collection Processing Engine)? I'd prefer to use to use the provided JAR files rather than having to compile the code. The question is fairly simple but I couldn't find the information in cTAKES's README (https://svn.apache.org/repos/asf/ctakes/trunk/README) or on Confluence (https://cwiki.apache.org/confluence/display/CTAKES/cTAKES+3.0 ). Thanks, Franck ---- Franck Dernoncourt [email protected] http://francky.me
