Thanks Brandon ! I tried that example, it doesn't work any more with latest cTakes libraries.
Regards, Bandeep On Fri, Aug 12, 2016 at 12:28 PM, Geise, Brandon D. <[email protected]> wrote: > I haven’t tried this but maybe have a look here: > https://svn.apache.org/repos/asf/ctakes/sandbox/ctakes- > spark-streaming-twitter/ > > > > Thanks, > > Brandon > > > > *From:* Bandeep Singh [mailto:[email protected]] > *Sent:* Friday, August 12, 2016 3:16 PM > *To:* [email protected] > *Subject:* [External] Re: How to use cTakes with SPARK > > > > Hi, > > > > Thanks for your reply ! > > > > But I am wondering if somebody has run cTakes using SPARK and actually > succeed. If yes, some resources/examples would be really helpful. > > > > Budha I tried building SPARK with cTAKES, however the when i execute a > sime HelloWorldAnnotator.java function it threw exceptions, which is > suspect is because the example was written a long back and doesn't comply > any more with the current libraries. > > > > Thanks Again, > > Bandeep > > > > On Fri, Aug 12, 2016 at 10:21 AM, buddha <[email protected]> wrote: > > cTAKES is a Java project, so it should work “out of the box” with the Java > Spark libraries. If you’re not used to using Spark + Java, then I would > not recommend starting with cTAKES. I suggest you start by using cTAKES as > a Maven dependency alongside the Spark Maven dependencies. > > > > If you want to use pySpark, then you are in the business of using Java > libs from Python, like in http://stackoverflow.com/ > questions/476968/using-a-java-library-from-python > <https://na01.safelinks.protection.outlook.com/?url=http%3a%2f%2fstackoverflow.com%2fquestions%2f476968%2fusing-a-java-library-from-python&data=01%7c01%7cbdgeise%40geisinger.edu%7cb2d65ee9cb8f4b32d8df08d3c2e5284b%7c37d46c567c664402a16055c2313b910d%7c0&sdata=yVV3Va5%2ba9NPQM%2fBU2gVhl6NqdAwmbtCEc%2bgwix1WkA%3d> > and > there is nothing special about cTAKES. > > > > cTAKES uses UIMA on the backend, and this can be extremely confusing to > new users. Maybe you should isolate your problems > > > > 1. Use Spark + Java libs > > 2. Use Python + Java libs > > 3. Learn cTAKES on it’s own turf. Namely, Java > > > > Apache projects notoriously have dependency problems, and Spark is no > exception. HA! “Exception”-- I’m funny. Anyway, don’t expect the two to > play together nicely at first. > > > > b > > > > ~~~~~ > > May All Your Sequences Converge > > > > On Aug 12, 2016, at 10:05 AM, Bandeep Singh <[email protected]> wrote: > > > > Hi Team, > > > > I am very new to cTAKES and just started learning how to use it. > > I am wondering how to use cTakes API with SPARk (pyspark preferably) for > Big data. > > Can somebody point me in the right direction. > > Till now I downloaded cTakes jars and tried building it with SPARK, but it > threw me some resource allocation exception. > > > > Any response will be highly appreciated. > > > Thanks, > > Bandeep > > > > > > ------------------------------ > > IMPORTANT WARNING: The information in this message (and the documents > attached to it, if any) is confidential and may be legally privileged. It > is intended solely for the addressee. Access to this message by anyone else > is unauthorized. If you are not the intended recipient, any disclosure, > copying, distribution or any action taken, or omitted to be taken, in > reliance on it is prohibited and may be unlawful. If you have received this > message in error, please delete all electronic copies of this message (and > the documents attached to it, if any), destroy any hard copies you may have > created and notify me immediately by replying to this email. Thank you. > Geisinger Health System utilizes an encryption process to safeguard > Protected Health Information and other confidential data contained in > external e-mail messages. If email is encrypted, the recipient will receive > an e-mail instructing them to sign on to the Geisinger Health System Secure > E-mail Message Center to retrieve the encrypted e-mail. >
