Hello, It turned out to be a data issue. In DBCollectionReader, some of the document keys returned by the ‘Query Get Documents Key’ query did not have a corresponding row in the table with document text (‘Query Get Document’). Fixing such rows, got rid of the exception and the job ran fine.
Thanks, Ritu From: buddha [mailto:[email protected]] Sent: Friday, August 12, 2016 12:28 PM To: Khanna, Ritu <[email protected]> Cc: [email protected] Subject: Re: ctakes 3.2.2/ytex exception when processing large number of documents My apologies, I didn’t look deep enough. It looks like org.apache.uima.analysis_engine.AnalysisEngineProcessException: is throwing the error (new font!) I’ll try to check the source today unless someone knows this package and can get back faster. b ~~~~~ May All Your Sequences Converge On Aug 12, 2016, at 9:12 AM, Khanna, Ritu <[email protected]<mailto:[email protected]>> wrote: We are using ytex DBCollectionReader in the pipeline which reads the document ids and document text from database tables. I’m not sure what f refers to here. From: buddha [mailto: [email protected]<mailto:[email protected]>] Sent: Friday, August 12, 2016 12:09 PM To: [email protected]<mailto:[email protected]> Subject: Re: ctakes 3.2.2/ytex exception when processing large number of documents Is “f” a file? "Can't find resource f or bundle java.util.PropertyResourceBundle, key text is null for docId=null" ~~~~~ May All Your Sequences Converge On Aug 12, 2016, at 9:06 AM, Khanna, Ritu <[email protected]<mailto:[email protected]>> wrote: Yes, we verified that. I also checked the database table with the instance_key that was in the exception and both document and document text exist. From: buddha [mailto:[email protected]] Sent: Friday, August 12, 2016 12:04 PM To: [email protected]<mailto:[email protected]> Subject: Re: ctakes 3.2.2/ytex exception when processing large number of documents Are you able to verify you have a docId for every document? This seems to be the trigger: " key text is null for docId=null " ~~~~~ May All Your Sequences Converge On Aug 12, 2016, at 8:55 AM, Khanna, Ritu <[email protected]<mailto:[email protected]>> wrote: key text is null for docId=null ********************************************************** Electronic Mail is not secure, may not be read every day, and should not be used for urgent or sensitive issues ********************************************************** Electronic Mail is not secure, may not be read every day, and should not be used for urgent or sensitive issues ********************************************************** Electronic Mail is not secure, may not be read every day, and should not be used for urgent or sensitive issues
