Hi all, I wanted to test cTakes 4.0 annotations against the CRAFT Goldstandard for a university thesis. Unfortunately the CRAFT texts are annotated with 2007 versions of UMLS ontologies (NCBI and GO). Bringing cTakes to fly with a current UMLS version was a piece of cake (not least with this mailing list...). But I could not create a custom dictionary with the GUI using a 2007 UMLS installation..
This seems to be related to changes in the dictionary schema. E.g. in 2007 ontologies a TUI009 (Invertrabate) can be found, which is not listed any more in the new schema. The resulting error when starting the custom dictionary creation: "...No enum constant org.apache.ctakes.gui.dictionary.umls.Tui.T009" I read about the (highly configurable & with great power comes great responsibility) cli tool. But I could not find it in the 4.0 files. Is there a possibility to use such an old UMLS installation with cTakes 4.0? Best Regards from Munich Massi
