Hello everyone, I am trying to configure ctakes to read input texts from a database and I was wondering if anyone has a working example piper file that shows how to pass the database connection parameters?
I have been using the piper file creator gui (bin/runPiperCreator.sh) in ctakes 4.0.1 on linux and my ultimate goal is to get ctakes to connect to an hsql database to read texts and write output back to the database. The only example I found so far is desc/ctakes-core/desc/collection_reader/JdbcCollectionReader.example.xml but I do not understand how to convert the parameters in this file to a piper syntax, and I'm having trouble understanding the parameters in the second half of the file. Does anyone have a working example that I could copy from? I was hoping I could just give parameters in the piper file but what I tried below is clearly wrong, and I don't understand where the db connection resource name comes from or how to get one. reader org.apache.ctakes.core.cr.JdbcCollectionReader SqlStatement="select * from meded_text" DocTextColName=txt DbConnResrcName=jdbc:hsqldb:file:testdb/testdb.script Any pointers would be much appreciated Eva
