I would be very interested to learn more about his, too. Any insight appreciated. Thanks!
From: "Mullane, Sean *HS" <[email protected]> Reply-To: "[email protected]" <[email protected]> Date: Tuesday, March 20, 2018 at 11:11 To: "'[email protected]'" <[email protected]> Subject: RE: Extract relation among entities in cTAKES It seems Liam’s email account is dead. Can anyone else can shed light on this? From: Mullane, Sean *HS Sent: Tuesday, March 20, 2018 2:03 PM To: 'Liam Bui'; [email protected] Subject: RE: Extract relation among entities in cTAKES Liam, Can you share your descriptor file? I am also trying to get the bodyLocation attribute for Identified Annotations but have so far not been successful in getting it to show up attached to the Identified Annotation. Any other help/suggestions would be great as well. Thanks, Sean From: Liam Bui [mailto:[email protected]] Sent: Monday, August 14, 2017 4:51 PM To: [email protected]<mailto:[email protected]> Subject: Re: Extract relation among entities in cTAKES After experimenting with cTAKES RelationExtraction, I managed to get it working. It turns out I need to specify the model file: builder.add( AnalysisEngineFactory.createEngineDescription(LocationOfRelationExtractorAnnotator.class, "classifierJarPath", "/org/apache/ctakes/relationextractor/models/location_of/model.jar") ); With that, I manged to extract "bodyLocation" for each Identified Annotation. How about "associatedSignSymptom"? I couldn't find any AnalysisEngine that would outputs this attribute. Thanks. On Mon, Aug 14, 2017 at 11:28 AM, Liam Bui <[email protected]<mailto:[email protected]>> wrote: Hi, I want to extract relation among entities using cTAKES, eg. procedure is carried on which anatomicalSite, SignSymptom occurs on which anatomicalSite and is part of which DiseaseDisorder. Based on cTAKES sourcecode, it seems these classes (DiseaseDisroder, Procedure, etc do support such relation through several attributes bodySite, associatedSignSymptom, etc). However, I do not know which cTAKES component or analysis engine that I should use to get these info. I also notice there is cTAKES Relation Extraction component, but I have no idea how to get it running. Does anyone happen to have insight on these topics? Thank you! -- Regards, Liam Bui ☎ (604) 352-1568<tel:(604)%20352-1568> | ✉ [email protected]<mailto:[email protected]>
