Hi Dear
Thank you for your reply. I follow the instruction and  run bash 
download-deps.sh. after yout email, I run ./download-deps.sh. The bin folder 
contains bleu, debug-joshua, extract-1best, GIZA++, joshua, joshua-decoder, 
meteor, mkcls, pipeline.pl, snt2cooc.out. But still when I run the pipeline, 
the following error is appeared: 

arezoo1@arezoo1-X450CC:~/joshua-tutorial/runs$ $JOSHUA/bin/pipeline.pl --rundir 
267 --readme "Baseline phrase run" --source es --target en --type phrase 
--corpus $FISHER/corpus/asr/fisher_train --tune $FISHER/corpus/asr/fisher_dev 
--test $FISHER/corpus/asr/fisher_dev2 --maxlen 11 --maxlen-tune 11 
--maxlen-test 11 --tuner-iterations 1 --lm-order 3
[train-copy-and-filter] rebuilding...
  
dep=/home/arezoo1/joshua-tutorial/fisher-callhome-corpus-master/corpus/asr/fisher_train.es
 [CHANGED]
  
dep=/home/arezoo1/joshua-tutorial/fisher-callhome-corpus-master/corpus/asr/fisher_train.en
 [CHANGED]
  dep=/home/arezoo1/joshua-tutorial/runs/267/data/train/train.es [NOT FOUND]
  dep=/home/arezoo1/joshua-tutorial/runs/267/data/train/train.en [NOT FOUND]
  cmd=/home/arezoo1/joshua/scripts/training/paste <(cat 
/home/arezoo1/joshua-tutorial/fisher-callhome-corpus-master/corpus/asr/fisher_train.es)
 <(cat 
/home/arezoo1/joshua-tutorial/fisher-callhome-corpus-master/corpus/asr/fisher_train.en)
 | /home/arezoo1/joshua/scripts/training/filter-empty-lines.pl | 
/home/arezoo1/joshua/scripts/support/split2files 
/home/arezoo1/joshua-tutorial/runs/267/data/train/train.es 
/home/arezoo1/joshua-tutorial/runs/267/data/train/train.en
  took 1 seconds (1s)
[train-tokenize-es] rebuilding...
  dep=/home/arezoo1/joshua-tutorial/runs/267/data/train/train.es [CHANGED]
  dep=/home/arezoo1/joshua-tutorial/runs/267/data/train/train.tok.es [NOT FOUND]
  cmd=/home/arezoo1/joshua/scripts/training/scat 
/home/arezoo1/joshua-tutorial/runs/267/data/train/train.es | 
/home/arezoo1/joshua/scripts/preparation/normalize.pl es | 
/home/arezoo1/joshua/scripts/preparation/tokenize.pl -l es 2> /dev/null > 
/home/arezoo1/joshua-tutorial/runs/267/data/train/train.tok.es
  took 7 seconds (7s)
[train-tokenize-en] rebuilding...
  dep=/home/arezoo1/joshua-tutorial/runs/267/data/train/train.en [CHANGED]
  dep=/home/arezoo1/joshua-tutorial/runs/267/data/train/train.tok.en [NOT FOUND]
  cmd=/home/arezoo1/joshua/scripts/training/scat 
/home/arezoo1/joshua-tutorial/runs/267/data/train/train.en | 
/home/arezoo1/joshua/scripts/preparation/normalize.pl en | 
/home/arezoo1/joshua/scripts/preparation/tokenize.pl -l en 2> /dev/null > 
/home/arezoo1/joshua-tutorial/runs/267/data/train/train.tok.en
  took 10 seconds (10s)
[train-trim] rebuilding...
  dep=/home/arezoo1/joshua-tutorial/runs/267/data/train/train.tok.es [CHANGED]
  dep=/home/arezoo1/joshua-tutorial/runs/267/data/train/train.tok.en [CHANGED]
  dep=/home/arezoo1/joshua-tutorial/runs/267/data/train/train.tok.11.es [NOT 
FOUND]
  dep=/home/arezoo1/joshua-tutorial/runs/267/data/train/train.tok.11.en [NOT 
FOUND]
  cmd=/home/arezoo1/joshua/scripts/training/paste 
/home/arezoo1/joshua-tutorial/runs/267/data/train/train.tok.es 
/home/arezoo1/joshua-tutorial/runs/267/data/train/train.tok.en | 
/home/arezoo1/joshua/scripts/training/trim_parallel_corpus.pl 11 | 
/home/arezoo1/joshua/scripts/support/split2files 
/home/arezoo1/joshua-tutorial/runs/267/data/train/train.tok.11.es 
/home/arezoo1/joshua-tutorial/runs/267/data/train/train.tok.11.en
  took 1 seconds (1s)
[train-lowercase-es] rebuilding...
  dep=/home/arezoo1/joshua-tutorial/runs/267/data/train/train.tok.11.es 
[CHANGED]
  dep=/home/arezoo1/joshua-tutorial/runs/267/data/train/train.tok.11.lc.es [NOT 
FOUND]
  cmd=cat /home/arezoo1/joshua-tutorial/runs/267/data/train/train.tok.11.es | 
/home/arezoo1/joshua/scripts/preparation/lowercase.pl > 
/home/arezoo1/joshua-tutorial/runs/267/data/train/train.tok.11.lc.es
  took 0 seconds (0s)
[train-lowercase-en] rebuilding...
  dep=/home/arezoo1/joshua-tutorial/runs/267/data/train/train.tok.11.en 
[CHANGED]
  dep=/home/arezoo1/joshua-tutorial/runs/267/data/train/train.tok.11.lc.en [NOT 
FOUND]
  cmd=cat /home/arezoo1/joshua-tutorial/runs/267/data/train/train.tok.11.en | 
/home/arezoo1/joshua/scripts/preparation/lowercase.pl > 
/home/arezoo1/joshua-tutorial/runs/267/data/train/train.tok.11.lc.en
  took 0 seconds (0s)
[train-vocab-es] rebuilding...
  dep=/home/arezoo1/joshua-tutorial/runs/267/data/train/corpus.es [CHANGED]
  dep=/home/arezoo1/joshua-tutorial/runs/267/data/train/vocab.es [NOT FOUND]
  cmd=cat /home/arezoo1/joshua-tutorial/runs/267/data/train/corpus.es | 
/home/arezoo1/joshua/scripts/training/build-vocab.pl > 
/home/arezoo1/joshua-tutorial/runs/267/data/train/vocab.es
  took 1 seconds (1s)
[train-vocab-en] rebuilding...
  dep=/home/arezoo1/joshua-tutorial/runs/267/data/train/corpus.en [CHANGED]
  dep=/home/arezoo1/joshua-tutorial/runs/267/data/train/vocab.en [NOT FOUND]
  cmd=cat /home/arezoo1/joshua-tutorial/runs/267/data/train/corpus.en | 
/home/arezoo1/joshua/scripts/training/build-vocab.pl > 
/home/arezoo1/joshua-tutorial/runs/267/data/train/vocab.en
  took 0 seconds (0s)
[tune-copy-and-filter] rebuilding...
  
dep=/home/arezoo1/joshua-tutorial/fisher-callhome-corpus-master/corpus/asr/fisher_dev.es
 [CHANGED]
  
dep=/home/arezoo1/joshua-tutorial/fisher-callhome-corpus-master/corpus/asr/fisher_dev.en.0
 [CHANGED]
  
dep=/home/arezoo1/joshua-tutorial/fisher-callhome-corpus-master/corpus/asr/fisher_dev.en.1
 [CHANGED]
  
dep=/home/arezoo1/joshua-tutorial/fisher-callhome-corpus-master/corpus/asr/fisher_dev.en.2
 [CHANGED]
  
dep=/home/arezoo1/joshua-tutorial/fisher-callhome-corpus-master/corpus/asr/fisher_dev.en.3
 [CHANGED]
  dep=/home/arezoo1/joshua-tutorial/runs/267/data/tune/tune.es [NOT FOUND]
  dep=/home/arezoo1/joshua-tutorial/runs/267/data/tune/tune.en.0 [NOT FOUND]
  dep=/home/arezoo1/joshua-tutorial/runs/267/data/tune/tune.en.1 [NOT FOUND]
  dep=/home/arezoo1/joshua-tutorial/runs/267/data/tune/tune.en.2 [NOT FOUND]
  dep=/home/arezoo1/joshua-tutorial/runs/267/data/tune/tune.en.3 [NOT FOUND]
  cmd=/home/arezoo1/joshua/scripts/training/paste <(cat 
/home/arezoo1/joshua-tutorial/fisher-callhome-corpus-master/corpus/asr/fisher_dev.es)
 <(cat 
/home/arezoo1/joshua-tutorial/fisher-callhome-corpus-master/corpus/asr/fisher_dev.en.0)
 <(cat 
/home/arezoo1/joshua-tutorial/fisher-callhome-corpus-master/corpus/asr/fisher_dev.en.1)
 <(cat 
/home/arezoo1/joshua-tutorial/fisher-callhome-corpus-master/corpus/asr/fisher_dev.en.2)
 <(cat 
/home/arezoo1/joshua-tutorial/fisher-callhome-corpus-master/corpus/asr/fisher_dev.en.3)
 | /home/arezoo1/joshua/scripts/training/filter-empty-lines.pl | 
/home/arezoo1/joshua/scripts/support/split2files 
/home/arezoo1/joshua-tutorial/runs/267/data/tune/tune.es 
/home/arezoo1/joshua-tutorial/runs/267/data/tune/tune.en.0 
/home/arezoo1/joshua-tutorial/runs/267/data/tune/tune.en.1 
/home/arezoo1/joshua-tutorial/runs/267/data/tune/tune.en.2 
/home/arezoo1/joshua-tutorial/runs/267/data/tune/tune.en.3
  took 0 seconds (0s)
[tune-tokenize-es] rebuilding...
  dep=/home/arezoo1/joshua-tutorial/runs/267/data/tune/tune.es [CHANGED]
  dep=/home/arezoo1/joshua-tutorial/runs/267/data/tune/tune.tok.es [NOT FOUND]
  cmd=/home/arezoo1/joshua/scripts/training/scat 
/home/arezoo1/joshua-tutorial/runs/267/data/tune/tune.es | 
/home/arezoo1/joshua/scripts/preparation/normalize.pl es | 
/home/arezoo1/joshua/scripts/preparation/tokenize.pl -l es 2> /dev/null > 
/home/arezoo1/joshua-tutorial/runs/267/data/tune/tune.tok.es
  took 0 seconds (0s)
[tune-tokenize-en.0] rebuilding...
  dep=/home/arezoo1/joshua-tutorial/runs/267/data/tune/tune.en.0 [CHANGED]
  dep=/home/arezoo1/joshua-tutorial/runs/267/data/tune/tune.tok.en.0 [NOT FOUND]
  cmd=/home/arezoo1/joshua/scripts/training/scat 
/home/arezoo1/joshua-tutorial/runs/267/data/tune/tune.en.0 | 
/home/arezoo1/joshua/scripts/preparation/normalize.pl en | 
/home/arezoo1/joshua/scripts/preparation/tokenize.pl -l en 2> /dev/null > 
/home/arezoo1/joshua-tutorial/runs/267/data/tune/tune.tok.en.0
  took 1 seconds (1s)
[tune-tokenize-en.1] rebuilding...
  dep=/home/arezoo1/joshua-tutorial/runs/267/data/tune/tune.en.1 [CHANGED]
  dep=/home/arezoo1/joshua-tutorial/runs/267/data/tune/tune.tok.en.1 [NOT FOUND]
  cmd=/home/arezoo1/joshua/scripts/training/scat 
/home/arezoo1/joshua-tutorial/runs/267/data/tune/tune.en.1 | 
/home/arezoo1/joshua/scripts/preparation/normalize.pl en | 
/home/arezoo1/joshua/scripts/preparation/tokenize.pl -l en 2> /dev/null > 
/home/arezoo1/joshua-tutorial/runs/267/data/tune/tune.tok.en.1
  took 0 seconds (0s)
[tune-tokenize-en.2] rebuilding...
  dep=/home/arezoo1/joshua-tutorial/runs/267/data/tune/tune.en.2 [CHANGED]
  dep=/home/arezoo1/joshua-tutorial/runs/267/data/tune/tune.tok.en.2 [NOT FOUND]
  cmd=/home/arezoo1/joshua/scripts/training/scat 
/home/arezoo1/joshua-tutorial/runs/267/data/tune/tune.en.2 | 
/home/arezoo1/joshua/scripts/preparation/normalize.pl en | 
/home/arezoo1/joshua/scripts/preparation/tokenize.pl -l en 2> /dev/null > 
/home/arezoo1/joshua-tutorial/runs/267/data/tune/tune.tok.en.2
  took 1 seconds (1s)
[tune-tokenize-en.3] rebuilding...
  dep=/home/arezoo1/joshua-tutorial/runs/267/data/tune/tune.en.3 [CHANGED]
  dep=/home/arezoo1/joshua-tutorial/runs/267/data/tune/tune.tok.en.3 [NOT FOUND]
  cmd=/home/arezoo1/joshua/scripts/training/scat 
/home/arezoo1/joshua-tutorial/runs/267/data/tune/tune.en.3 | 
/home/arezoo1/joshua/scripts/preparation/normalize.pl en | 
/home/arezoo1/joshua/scripts/preparation/tokenize.pl -l en 2> /dev/null > 
/home/arezoo1/joshua-tutorial/runs/267/data/tune/tune.tok.en.3
  took 0 seconds (0s)
[tune-trim] rebuilding...
  dep=/home/arezoo1/joshua-tutorial/runs/267/data/tune/tune.tok.es [CHANGED]
  dep=/home/arezoo1/joshua-tutorial/runs/267/data/tune/tune.tok.en.0 [CHANGED]
  dep=/home/arezoo1/joshua-tutorial/runs/267/data/tune/tune.tok.en.1 [CHANGED]
  dep=/home/arezoo1/joshua-tutorial/runs/267/data/tune/tune.tok.en.2 [CHANGED]
  dep=/home/arezoo1/joshua-tutorial/runs/267/data/tune/tune.tok.en.3 [CHANGED]
  dep=/home/arezoo1/joshua-tutorial/runs/267/data/tune/tune.tok.11.es [NOT 
FOUND]
  dep=/home/arezoo1/joshua-tutorial/runs/267/data/tune/tune.tok.11.en.0 [NOT 
FOUND]
  dep=/home/arezoo1/joshua-tutorial/runs/267/data/tune/tune.tok.11.en.1 [NOT 
FOUND]
  dep=/home/arezoo1/joshua-tutorial/runs/267/data/tune/tune.tok.11.en.2 [NOT 
FOUND]
  dep=/home/arezoo1/joshua-tutorial/runs/267/data/tune/tune.tok.11.en.3 [NOT 
FOUND]
  cmd=/home/arezoo1/joshua/scripts/training/paste 
/home/arezoo1/joshua-tutorial/runs/267/data/tune/tune.tok.es 
/home/arezoo1/joshua-tutorial/runs/267/data/tune/tune.tok.en.0 
/home/arezoo1/joshua-tutorial/runs/267/data/tune/tune.tok.en.1 
/home/arezoo1/joshua-tutorial/runs/267/data/tune/tune.tok.en.2 
/home/arezoo1/joshua-tutorial/runs/267/data/tune/tune.tok.en.3 | 
/home/arezoo1/joshua/scripts/training/trim_parallel_corpus.pl 11 | 
/home/arezoo1/joshua/scripts/support/split2files 
/home/arezoo1/joshua-tutorial/runs/267/data/tune/tune.tok.11.es 
/home/arezoo1/joshua-tutorial/runs/267/data/tune/tune.tok.11.en.0 
/home/arezoo1/joshua-tutorial/runs/267/data/tune/tune.tok.11.en.1 
/home/arezoo1/joshua-tutorial/runs/267/data/tune/tune.tok.11.en.2 
/home/arezoo1/joshua-tutorial/runs/267/data/tune/tune.tok.11.en.3
  took 0 seconds (0s)
[tune-lowercase-es] rebuilding...
  dep=/home/arezoo1/joshua-tutorial/runs/267/data/tune/tune.tok.11.es [CHANGED]
  dep=/home/arezoo1/joshua-tutorial/runs/267/data/tune/tune.tok.11.lc.es [NOT 
FOUND]
  cmd=cat /home/arezoo1/joshua-tutorial/runs/267/data/tune/tune.tok.11.es | 
/home/arezoo1/joshua/scripts/preparation/lowercase.pl > 
/home/arezoo1/joshua-tutorial/runs/267/data/tune/tune.tok.11.lc.es
  took 0 seconds (0s)
[tune-lowercase-en.0] rebuilding...
  dep=/home/arezoo1/joshua-tutorial/runs/267/data/tune/tune.tok.11.en.0 
[CHANGED]
  dep=/home/arezoo1/joshua-tutorial/runs/267/data/tune/tune.tok.11.lc.en.0 [NOT 
FOUND]
  cmd=cat /home/arezoo1/joshua-tutorial/runs/267/data/tune/tune.tok.11.en.0 | 
/home/arezoo1/joshua/scripts/preparation/lowercase.pl > 
/home/arezoo1/joshua-tutorial/runs/267/data/tune/tune.tok.11.lc.en.0
  took 0 seconds (0s)
[tune-lowercase-en.1] rebuilding...
  dep=/home/arezoo1/joshua-tutorial/runs/267/data/tune/tune.tok.11.en.1 
[CHANGED]
  dep=/home/arezoo1/joshua-tutorial/runs/267/data/tune/tune.tok.11.lc.en.1 [NOT 
FOUND]
  cmd=cat /home/arezoo1/joshua-tutorial/runs/267/data/tune/tune.tok.11.en.1 | 
/home/arezoo1/joshua/scripts/preparation/lowercase.pl > 
/home/arezoo1/joshua-tutorial/runs/267/data/tune/tune.tok.11.lc.en.1
  took 0 seconds (0s)
[tune-lowercase-en.2] rebuilding...
  dep=/home/arezoo1/joshua-tutorial/runs/267/data/tune/tune.tok.11.en.2 
[CHANGED]
  dep=/home/arezoo1/joshua-tutorial/runs/267/data/tune/tune.tok.11.lc.en.2 [NOT 
FOUND]
  cmd=cat /home/arezoo1/joshua-tutorial/runs/267/data/tune/tune.tok.11.en.2 | 
/home/arezoo1/joshua/scripts/preparation/lowercase.pl > 
/home/arezoo1/joshua-tutorial/runs/267/data/tune/tune.tok.11.lc.en.2
  took 0 seconds (0s)
[tune-lowercase-en.3] rebuilding...
  dep=/home/arezoo1/joshua-tutorial/runs/267/data/tune/tune.tok.11.en.3 
[CHANGED]
  dep=/home/arezoo1/joshua-tutorial/runs/267/data/tune/tune.tok.11.lc.en.3 [NOT 
FOUND]
  cmd=cat /home/arezoo1/joshua-tutorial/runs/267/data/tune/tune.tok.11.en.3 | 
/home/arezoo1/joshua/scripts/preparation/lowercase.pl > 
/home/arezoo1/joshua-tutorial/runs/267/data/tune/tune.tok.11.lc.en.3
  took 0 seconds (0s)
[tune-vocab-es] rebuilding...
  dep=/home/arezoo1/joshua-tutorial/runs/267/data/tune/corpus.es [CHANGED]
  dep=/home/arezoo1/joshua-tutorial/runs/267/data/tune/vocab.es [NOT FOUND]
  cmd=cat /home/arezoo1/joshua-tutorial/runs/267/data/tune/corpus.es | 
/home/arezoo1/joshua/scripts/training/build-vocab.pl > 
/home/arezoo1/joshua-tutorial/runs/267/data/tune/vocab.es
  took 0 seconds (0s)
[tune-vocab-en.0] rebuilding...
  dep=/home/arezoo1/joshua-tutorial/runs/267/data/tune/corpus.en.0 [CHANGED]
  dep=/home/arezoo1/joshua-tutorial/runs/267/data/tune/vocab.en.0 [NOT FOUND]
  cmd=cat /home/arezoo1/joshua-tutorial/runs/267/data/tune/corpus.en.0 | 
/home/arezoo1/joshua/scripts/training/build-vocab.pl > 
/home/arezoo1/joshua-tutorial/runs/267/data/tune/vocab.en.0
  took 0 seconds (0s)
[tune-vocab-en.1] rebuilding...
  dep=/home/arezoo1/joshua-tutorial/runs/267/data/tune/corpus.en.1 [CHANGED]
  dep=/home/arezoo1/joshua-tutorial/runs/267/data/tune/vocab.en.1 [NOT FOUND]
  cmd=cat /home/arezoo1/joshua-tutorial/runs/267/data/tune/corpus.en.1 | 
/home/arezoo1/joshua/scripts/training/build-vocab.pl > 
/home/arezoo1/joshua-tutorial/runs/267/data/tune/vocab.en.1
  took 0 seconds (0s)
[tune-vocab-en.2] rebuilding...
  dep=/home/arezoo1/joshua-tutorial/runs/267/data/tune/corpus.en.2 [CHANGED]
  dep=/home/arezoo1/joshua-tutorial/runs/267/data/tune/vocab.en.2 [NOT FOUND]
  cmd=cat /home/arezoo1/joshua-tutorial/runs/267/data/tune/corpus.en.2 | 
/home/arezoo1/joshua/scripts/training/build-vocab.pl > 
/home/arezoo1/joshua-tutorial/runs/267/data/tune/vocab.en.2
  took 0 seconds (0s)
[tune-vocab-en.3] rebuilding...
  dep=/home/arezoo1/joshua-tutorial/runs/267/data/tune/corpus.en.3 [CHANGED]
  dep=/home/arezoo1/joshua-tutorial/runs/267/data/tune/vocab.en.3 [NOT FOUND]
  cmd=cat /home/arezoo1/joshua-tutorial/runs/267/data/tune/corpus.en.3 | 
/home/arezoo1/joshua/scripts/training/build-vocab.pl > 
/home/arezoo1/joshua-tutorial/runs/267/data/tune/vocab.en.3
  took 0 seconds (0s)
[test-copy-and-filter] rebuilding...
  
dep=/home/arezoo1/joshua-tutorial/fisher-callhome-corpus-master/corpus/asr/fisher_dev2.es
 [CHANGED]
  
dep=/home/arezoo1/joshua-tutorial/fisher-callhome-corpus-master/corpus/asr/fisher_dev2.en.0
 [CHANGED]
  
dep=/home/arezoo1/joshua-tutorial/fisher-callhome-corpus-master/corpus/asr/fisher_dev2.en.1
 [CHANGED]
  
dep=/home/arezoo1/joshua-tutorial/fisher-callhome-corpus-master/corpus/asr/fisher_dev2.en.2
 [CHANGED]
  
dep=/home/arezoo1/joshua-tutorial/fisher-callhome-corpus-master/corpus/asr/fisher_dev2.en.3
 [CHANGED]
  dep=/home/arezoo1/joshua-tutorial/runs/267/data/test/test.es [NOT FOUND]
  dep=/home/arezoo1/joshua-tutorial/runs/267/data/test/test.en.0 [NOT FOUND]
  dep=/home/arezoo1/joshua-tutorial/runs/267/data/test/test.en.1 [NOT FOUND]
  dep=/home/arezoo1/joshua-tutorial/runs/267/data/test/test.en.2 [NOT FOUND]
  dep=/home/arezoo1/joshua-tutorial/runs/267/data/test/test.en.3 [NOT FOUND]
  cmd=/home/arezoo1/joshua/scripts/training/paste <(cat 
/home/arezoo1/joshua-tutorial/fisher-callhome-corpus-master/corpus/asr/fisher_dev2.es)
 <(cat 
/home/arezoo1/joshua-tutorial/fisher-callhome-corpus-master/corpus/asr/fisher_dev2.en.0)
 <(cat 
/home/arezoo1/joshua-tutorial/fisher-callhome-corpus-master/corpus/asr/fisher_dev2.en.1)
 <(cat 
/home/arezoo1/joshua-tutorial/fisher-callhome-corpus-master/corpus/asr/fisher_dev2.en.2)
 <(cat 
/home/arezoo1/joshua-tutorial/fisher-callhome-corpus-master/corpus/asr/fisher_dev2.en.3)
 | /home/arezoo1/joshua/scripts/support/split2files 
/home/arezoo1/joshua-tutorial/runs/267/data/test/test.es 
/home/arezoo1/joshua-tutorial/runs/267/data/test/test.en.0 
/home/arezoo1/joshua-tutorial/runs/267/data/test/test.en.1 
/home/arezoo1/joshua-tutorial/runs/267/data/test/test.en.2 
/home/arezoo1/joshua-tutorial/runs/267/data/test/test.en.3
  took 1 seconds (1s)
[test-tokenize-es] rebuilding...
  dep=/home/arezoo1/joshua-tutorial/runs/267/data/test/test.es [CHANGED]
  dep=/home/arezoo1/joshua-tutorial/runs/267/data/test/test.tok.es [NOT FOUND]
  cmd=/home/arezoo1/joshua/scripts/training/scat 
/home/arezoo1/joshua-tutorial/runs/267/data/test/test.es | 
/home/arezoo1/joshua/scripts/preparation/normalize.pl es | 
/home/arezoo1/joshua/scripts/preparation/tokenize.pl -l es 2> /dev/null > 
/home/arezoo1/joshua-tutorial/runs/267/data/test/test.tok.es
  took 0 seconds (0s)
[test-tokenize-en.0] rebuilding...
  dep=/home/arezoo1/joshua-tutorial/runs/267/data/test/test.en.0 [CHANGED]
  dep=/home/arezoo1/joshua-tutorial/runs/267/data/test/test.tok.en.0 [NOT FOUND]
  cmd=/home/arezoo1/joshua/scripts/training/scat 
/home/arezoo1/joshua-tutorial/runs/267/data/test/test.en.0 | 
/home/arezoo1/joshua/scripts/preparation/normalize.pl en | 
/home/arezoo1/joshua/scripts/preparation/tokenize.pl -l en 2> /dev/null > 
/home/arezoo1/joshua-tutorial/runs/267/data/test/test.tok.en.0
  took 0 seconds (0s)
[test-tokenize-en.1] rebuilding...
  dep=/home/arezoo1/joshua-tutorial/runs/267/data/test/test.en.1 [CHANGED]
  dep=/home/arezoo1/joshua-tutorial/runs/267/data/test/test.tok.en.1 [NOT FOUND]
  cmd=/home/arezoo1/joshua/scripts/training/scat 
/home/arezoo1/joshua-tutorial/runs/267/data/test/test.en.1 | 
/home/arezoo1/joshua/scripts/preparation/normalize.pl en | 
/home/arezoo1/joshua/scripts/preparation/tokenize.pl -l en 2> /dev/null > 
/home/arezoo1/joshua-tutorial/runs/267/data/test/test.tok.en.1
  took 0 seconds (0s)
[test-tokenize-en.2] rebuilding...
  dep=/home/arezoo1/joshua-tutorial/runs/267/data/test/test.en.2 [CHANGED]
  dep=/home/arezoo1/joshua-tutorial/runs/267/data/test/test.tok.en.2 [NOT FOUND]
  cmd=/home/arezoo1/joshua/scripts/training/scat 
/home/arezoo1/joshua-tutorial/runs/267/data/test/test.en.2 | 
/home/arezoo1/joshua/scripts/preparation/normalize.pl en | 
/home/arezoo1/joshua/scripts/preparation/tokenize.pl -l en 2> /dev/null > 
/home/arezoo1/joshua-tutorial/runs/267/data/test/test.tok.en.2
  took 0 seconds (0s)
[test-tokenize-en.3] rebuilding...
  dep=/home/arezoo1/joshua-tutorial/runs/267/data/test/test.en.3 [CHANGED]
  dep=/home/arezoo1/joshua-tutorial/runs/267/data/test/test.tok.en.3 [NOT FOUND]
  cmd=/home/arezoo1/joshua/scripts/training/scat 
/home/arezoo1/joshua-tutorial/runs/267/data/test/test.en.3 | 
/home/arezoo1/joshua/scripts/preparation/normalize.pl en | 
/home/arezoo1/joshua/scripts/preparation/tokenize.pl -l en 2> /dev/null > 
/home/arezoo1/joshua-tutorial/runs/267/data/test/test.tok.en.3
  took 0 seconds (0s)
[test-trim] rebuilding...
  dep=/home/arezoo1/joshua-tutorial/runs/267/data/test/test.tok.es [CHANGED]
  dep=/home/arezoo1/joshua-tutorial/runs/267/data/test/test.tok.en.0 [CHANGED]
  dep=/home/arezoo1/joshua-tutorial/runs/267/data/test/test.tok.en.1 [CHANGED]
  dep=/home/arezoo1/joshua-tutorial/runs/267/data/test/test.tok.en.2 [CHANGED]
  dep=/home/arezoo1/joshua-tutorial/runs/267/data/test/test.tok.en.3 [CHANGED]
  dep=/home/arezoo1/joshua-tutorial/runs/267/data/test/test.tok.11.es [NOT 
FOUND]
  dep=/home/arezoo1/joshua-tutorial/runs/267/data/test/test.tok.11.en.0 [NOT 
FOUND]
  dep=/home/arezoo1/joshua-tutorial/runs/267/data/test/test.tok.11.en.1 [NOT 
FOUND]
  dep=/home/arezoo1/joshua-tutorial/runs/267/data/test/test.tok.11.en.2 [NOT 
FOUND]
  dep=/home/arezoo1/joshua-tutorial/runs/267/data/test/test.tok.11.en.3 [NOT 
FOUND]
  cmd=/home/arezoo1/joshua/scripts/training/paste 
/home/arezoo1/joshua-tutorial/runs/267/data/test/test.tok.es 
/home/arezoo1/joshua-tutorial/runs/267/data/test/test.tok.en.0 
/home/arezoo1/joshua-tutorial/runs/267/data/test/test.tok.en.1 
/home/arezoo1/joshua-tutorial/runs/267/data/test/test.tok.en.2 
/home/arezoo1/joshua-tutorial/runs/267/data/test/test.tok.en.3 | 
/home/arezoo1/joshua/scripts/training/trim_parallel_corpus.pl 11 | 
/home/arezoo1/joshua/scripts/support/split2files 
/home/arezoo1/joshua-tutorial/runs/267/data/test/test.tok.11.es 
/home/arezoo1/joshua-tutorial/runs/267/data/test/test.tok.11.en.0 
/home/arezoo1/joshua-tutorial/runs/267/data/test/test.tok.11.en.1 
/home/arezoo1/joshua-tutorial/runs/267/data/test/test.tok.11.en.2 
/home/arezoo1/joshua-tutorial/runs/267/data/test/test.tok.11.en.3
  took 0 seconds (0s)
[test-lowercase-es] rebuilding...
  dep=/home/arezoo1/joshua-tutorial/runs/267/data/test/test.tok.11.es [CHANGED]
  dep=/home/arezoo1/joshua-tutorial/runs/267/data/test/test.tok.11.lc.es [NOT 
FOUND]
  cmd=cat /home/arezoo1/joshua-tutorial/runs/267/data/test/test.tok.11.es | 
/home/arezoo1/joshua/scripts/preparation/lowercase.pl > 
/home/arezoo1/joshua-tutorial/runs/267/data/test/test.tok.11.lc.es
  took 0 seconds (0s)
[test-lowercase-en.0] rebuilding...
  dep=/home/arezoo1/joshua-tutorial/runs/267/data/test/test.tok.11.en.0 
[CHANGED]
  dep=/home/arezoo1/joshua-tutorial/runs/267/data/test/test.tok.11.lc.en.0 [NOT 
FOUND]
  cmd=cat /home/arezoo1/joshua-tutorial/runs/267/data/test/test.tok.11.en.0 | 
/home/arezoo1/joshua/scripts/preparation/lowercase.pl > 
/home/arezoo1/joshua-tutorial/runs/267/data/test/test.tok.11.lc.en.0
  took 0 seconds (0s)
[test-lowercase-en.1] rebuilding...
  dep=/home/arezoo1/joshua-tutorial/runs/267/data/test/test.tok.11.en.1 
[CHANGED]
  dep=/home/arezoo1/joshua-tutorial/runs/267/data/test/test.tok.11.lc.en.1 [NOT 
FOUND]
  cmd=cat /home/arezoo1/joshua-tutorial/runs/267/data/test/test.tok.11.en.1 | 
/home/arezoo1/joshua/scripts/preparation/lowercase.pl > 
/home/arezoo1/joshua-tutorial/runs/267/data/test/test.tok.11.lc.en.1
  took 0 seconds (0s)
[test-lowercase-en.2] rebuilding...
  dep=/home/arezoo1/joshua-tutorial/runs/267/data/test/test.tok.11.en.2 
[CHANGED]
  dep=/home/arezoo1/joshua-tutorial/runs/267/data/test/test.tok.11.lc.en.2 [NOT 
FOUND]
  cmd=cat /home/arezoo1/joshua-tutorial/runs/267/data/test/test.tok.11.en.2 | 
/home/arezoo1/joshua/scripts/preparation/lowercase.pl > 
/home/arezoo1/joshua-tutorial/runs/267/data/test/test.tok.11.lc.en.2
  took 1 seconds (1s)
[test-lowercase-en.3] rebuilding...
  dep=/home/arezoo1/joshua-tutorial/runs/267/data/test/test.tok.11.en.3 
[CHANGED]
  dep=/home/arezoo1/joshua-tutorial/runs/267/data/test/test.tok.11.lc.en.3 [NOT 
FOUND]
  cmd=cat /home/arezoo1/joshua-tutorial/runs/267/data/test/test.tok.11.en.3 | 
/home/arezoo1/joshua/scripts/preparation/lowercase.pl > 
/home/arezoo1/joshua-tutorial/runs/267/data/test/test.tok.11.lc.en.3
  took 0 seconds (0s)
[test-vocab-es] rebuilding...
  dep=/home/arezoo1/joshua-tutorial/runs/267/data/test/corpus.es [CHANGED]
  dep=/home/arezoo1/joshua-tutorial/runs/267/data/test/vocab.es [NOT FOUND]
  cmd=cat /home/arezoo1/joshua-tutorial/runs/267/data/test/corpus.es | 
/home/arezoo1/joshua/scripts/training/build-vocab.pl > 
/home/arezoo1/joshua-tutorial/runs/267/data/test/vocab.es
  took 0 seconds (0s)
[test-vocab-en.0] rebuilding...
  dep=/home/arezoo1/joshua-tutorial/runs/267/data/test/corpus.en.0 [CHANGED]
  dep=/home/arezoo1/joshua-tutorial/runs/267/data/test/vocab.en.0 [NOT FOUND]
  cmd=cat /home/arezoo1/joshua-tutorial/runs/267/data/test/corpus.en.0 | 
/home/arezoo1/joshua/scripts/training/build-vocab.pl > 
/home/arezoo1/joshua-tutorial/runs/267/data/test/vocab.en.0
  took 0 seconds (0s)
[test-vocab-en.1] rebuilding...
  dep=/home/arezoo1/joshua-tutorial/runs/267/data/test/corpus.en.1 [CHANGED]
  dep=/home/arezoo1/joshua-tutorial/runs/267/data/test/vocab.en.1 [NOT FOUND]
  cmd=cat /home/arezoo1/joshua-tutorial/runs/267/data/test/corpus.en.1 | 
/home/arezoo1/joshua/scripts/training/build-vocab.pl > 
/home/arezoo1/joshua-tutorial/runs/267/data/test/vocab.en.1
  took 0 seconds (0s)
[test-vocab-en.2] rebuilding...
  dep=/home/arezoo1/joshua-tutorial/runs/267/data/test/corpus.en.2 [CHANGED]
  dep=/home/arezoo1/joshua-tutorial/runs/267/data/test/vocab.en.2 [NOT FOUND]
  cmd=cat /home/arezoo1/joshua-tutorial/runs/267/data/test/corpus.en.2 | 
/home/arezoo1/joshua/scripts/training/build-vocab.pl > 
/home/arezoo1/joshua-tutorial/runs/267/data/test/vocab.en.2
  took 0 seconds (0s)
[test-vocab-en.3] rebuilding...
  dep=/home/arezoo1/joshua-tutorial/runs/267/data/test/corpus.en.3 [CHANGED]
  dep=/home/arezoo1/joshua-tutorial/runs/267/data/test/vocab.en.3 [NOT FOUND]
  cmd=cat /home/arezoo1/joshua-tutorial/runs/267/data/test/corpus.en.3 | 
/home/arezoo1/joshua/scripts/training/build-vocab.pl > 
/home/arezoo1/joshua-tutorial/runs/267/data/test/vocab.en.3
  took 0 seconds (0s)
[source-numlines] rebuilding...
  dep=/home/arezoo1/joshua-tutorial/runs/267/data/train/corpus.es [CHANGED]
  cmd=cat /home/arezoo1/joshua-tutorial/runs/267/data/train/corpus.es | wc -l
  took 0 seconds (0s)
[source-numlines] retrieved cached result => 77457
[giza-0] rebuilding...
  dep=/home/arezoo1/joshua-tutorial/runs/267/data/train/splits/0/corpus.es 
[CHANGED]
  dep=/home/arezoo1/joshua-tutorial/runs/267/data/train/splits/0/corpus.en 
[CHANGED]
  dep=alignments/0/model/aligned.grow-diag-final [NOT FOUND]
  cmd=rm -f alignments/0/corpus.0-0.*; 
/home/arezoo1/joshua/scripts/training/run-giza.pl --root-dir alignments/0 -e en 
-f es -corpus /home/arezoo1/joshua-tutorial/runs/267/data/train/splits/0/corpus 
-merge grow-diag-final  > alignments/0/giza.log 2>&1
*** Error in `/home/arezoo1/joshua/ext/symal/symal': double free or corruption 
(out): 0x0000556d04e24160 ***
======= Backtrace: =========
/lib/x86_64-linux-gnu/libc.so.6(+0x7908b)[0x7f23ccbad08b]
/lib/x86_64-linux-gnu/libc.so.6(+0x826fa)[0x7f23ccbb66fa]
/lib/x86_64-linux-gnu/libc.so.6(cfree+0x4c)[0x7f23ccbba12c]
/home/arezoo1/joshua/ext/symal/symal(+0x2b5a)[0x556d04c1cb5a]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xf1)[0x7f23ccb543f1]
/home/arezoo1/joshua/ext/symal/symal(+0x5f4a)[0x556d04c1ff4a]
======= Memory map: ========
556d04c1a000-556d04c23000 r-xp 00000000 08:0a 1446968                    
/home/arezoo1/joshua/ext/symal/symal
556d04e23000-556d04e24000 r--p 00009000 08:0a 1446968                    
/home/arezoo1/joshua/ext/symal/symal
556d04e24000-556d04e25000 rw-p 0000a000 08:0a 1446968                    
/home/arezoo1/joshua/ext/symal/symal
556d04e25000-556d04e27000 rw-p 00000000 00:00 0 
556d06a7d000-556d06b33000 rw-p 00000000 00:00 0                          [heap]
7f23c8000000-7f23c8021000 rw-p 00000000 00:00 0 
7f23c8021000-7f23cc000000 ---p 00000000 00:00 0 
7f23cc82b000-7f23cc933000 r-xp 00000000 08:0a 1708999                    
/lib/x86_64-linux-gnu/libm-2.24.so
7f23cc933000-7f23ccb32000 ---p 00108000 08:0a 1708999                    
/lib/x86_64-linux-gnu/libm-2.24.so
7f23ccb32000-7f23ccb33000 r--p 00107000 08:0a 1708999                    
/lib/x86_64-linux-gnu/libm-2.24.so
7f23ccb33000-7f23ccb34000 rw-p 00108000 08:0a 1708999                    
/lib/x86_64-linux-gnu/libm-2.24.so
7f23ccb34000-7f23cccf1000 r-xp 00000000 08:0a 1708931                    
/lib/x86_64-linux-gnu/libc-2.24.so
7f23cccf1000-7f23ccef1000 ---p 001bd000 08:0a 1708931                    
/lib/x86_64-linux-gnu/libc-2.24.so
7f23ccef1000-7f23ccef5000 r--p 001bd000 08:0a 1708931                    
/lib/x86_64-linux-gnu/libc-2.24.so
7f23ccef5000-7f23ccef7000 rw-p 001c1000 08:0a 1708931                    
/lib/x86_64-linux-gnu/libc-2.24.so
7f23ccef7000-7f23ccefb000 rw-p 00000000 00:00 0 
7f23ccefb000-7f23ccf11000 r-xp 00000000 08:0a 1708971                    
/lib/x86_64-linux-gnu/libgcc_s.so.1
7f23ccf11000-7f23cd110000 ---p 00016000 08:0a 1708971                    
/lib/x86_64-linux-gnu/libgcc_s.so.1
7f23cd110000-7f23cd111000 r--p 00015000 08:0a 1708971                    
/lib/x86_64-linux-gnu/libgcc_s.so.1
7f23cd111000-7f23cd112000 rw-p 00016000 08:0a 1708971                    
/lib/x86_64-linux-gnu/libgcc_s.so.1
7f23cd112000-7f23cd28b000 r-xp 00000000 08:0a 1976366                    
/usr/lib/x86_64-linux-gnu/libstdc++.so.6.0.22
7f23cd28b000-7f23cd48a000 ---p 00179000 08:0a 1976366                    
/usr/lib/x86_64-linux-gnu/libstdc++.so.6.0.22
7f23cd48a000-7f23cd494000 r--p 00178000 08:0a 1976366                    
/usr/lib/x86_64-linux-gnu/libstdc++.so.6.0.22
7f23cd494000-7f23cd496000 rw-p 00182000 08:0a 1976366                    
/usr/lib/x86_64-linux-gnu/libstdc++.so.6.0.22
7f23cd496000-7f23cd49a000 rw-p 00000000 00:00 0 
7f23cd49a000-7f23cd4bf000 r-xp 00000000 08:0a 1708903                    
/lib/x86_64-linux-gnu/ld-2.24.so
7f23cd69a000-7f23cd69e000 rw-p 00000000 00:00 0 
7f23cd6bb000-7f23cd6bf000 rw-p 00000000 00:00 0 
7f23cd6bf000-7f23cd6c0000 r--p 00025000 08:0a 1708903                    
/lib/x86_64-linux-gnu/ld-2.24.so
7f23cd6c0000-7f23cd6c1000 rw-p 00026000 08:0a 1708903                    
/lib/x86_64-linux-gnu/ld-2.24.so
7f23cd6c1000-7f23cd6c2000 rw-p 00000000 00:00 0 
7ffea6a36000-7ffea6a58000 rw-p 00000000 00:00 0                          [stack]
7ffea6b27000-7ffea6b29000 r--p 00000000 00:00 0                          [vvar]
7ffea6b29000-7ffea6b2b000 r-xp 00000000 00:00 0                          [vdso]
ffffffffff600000-ffffffffff601000 r-xp 00000000 00:00 0                  
[vsyscall]
  JOB FAILED (return code 2)
[aligner-combine] rebuilding...
  dep=alignments/0/model/aligned.grow-diag-final [CHANGED]
  dep=alignments/training.align [NOT FOUND]
  cmd=cat alignments/0/model/aligned.grow-diag-final > alignments/training.align
  took 0 seconds (0s)
[thrax-input-file] rebuilding...
  dep=/home/arezoo1/joshua-tutorial/runs/267/data/train/corpus.es [CHANGED]
  dep=/home/arezoo1/joshua-tutorial/runs/267/data/train/corpus.en [CHANGED]
  dep=alignments/training.align [CHANGED]
  dep=/home/arezoo1/joshua-tutorial/runs/267/data/train/thrax-input-file [NOT 
FOUND]
  cmd=/home/arezoo1/joshua/scripts/training/paste 
/home/arezoo1/joshua-tutorial/runs/267/data/train/corpus.es 
/home/arezoo1/joshua-tutorial/runs/267/data/train/corpus.en 
alignments/training.align | perl -pe 's/\t/ ||| /g' | grep -v '()' | grep -v 
'||| \+$' > /home/arezoo1/joshua-tutorial/runs/267/data/train/thrax-input-file
  took 1 seconds (1s)
[thrax-prep] rebuilding...
  dep=/home/arezoo1/joshua-tutorial/runs/267/data/train/thrax-input-file 
[CHANGED]
  dep=grammar.gz [NOT FOUND]
  cmd=hadoop fs -rm -r 
pipeline-es-en-phrase-_home_arezoo1_joshua-tutorial_runs_267; hadoop fs -mkdir 
pipeline-es-en-phrase-_home_arezoo1_joshua-tutorial_runs_267; hadoop fs -put 
/home/arezoo1/joshua-tutorial/runs/267/data/train/thrax-input-file 
pipeline-es-en-phrase-_home_arezoo1_joshua-tutorial_runs_267/input-file
  took 3 seconds (3s)
[thrax-run] rebuilding...
  dep=/home/arezoo1/joshua-tutorial/runs/267/data/train/thrax-input-file 
[CHANGED]
  dep=thrax-phrase.conf [CHANGED]
  dep=grammar.gz [NOT FOUND]
  cmd=hadoop jar /home/arezoo1/joshua/thrax/bin/thrax.jar -D 
mapreduce.task.timeout=0 -D mapreduce.map.java.opts='-Xmx4g' -D 
mapreduce.reduce.java.opts='-Xmx4g' -D hadoop.tmp.dir=/tmp thrax-phrase.conf 
pipeline-es-en-phrase-_home_arezoo1_joshua-tutorial_runs_267 > thrax.log 2>&1; 
rm -f grammar grammar.gz; hadoop fs -cat 
pipeline-es-en-phrase-_home_arezoo1_joshua-tutorial_runs_267/final/* | gzip -cd 
| /home/arezoo1/joshua/scripts/training/filter-rules.pl -t 100 | gzip -9n > 
grammar.gz
  took 29 seconds (29s)
17/08/07 07:20:53 INFO Configuration.deprecation: io.bytes.per.checksum is 
deprecated. Instead, use dfs.bytes-per-checksum
17/08/07 07:20:53 INFO fs.TrashPolicyDefault: Namenode trash configuration: 
Deletion interval = 0 minutes, Emptier interval = 0 minutes.
Deleted pipeline-es-en-phrase-_home_arezoo1_joshua-tutorial_runs_267
[pack-grammar] rebuilding...
  dep=/home/arezoo1/joshua-tutorial/runs/267/grammar.packed/vocabulary [NOT 
FOUND]
  dep=/home/arezoo1/joshua-tutorial/runs/267/grammar.packed/encoding [NOT FOUND]
  dep=/home/arezoo1/joshua-tutorial/runs/267/grammar.packed/slice_00000.source 
[NOT FOUND]
  cmd=/home/arezoo1/joshua/scripts/support/grammar-packer.pl -a -T /tmp -m 8g 
-g grammar.gz -o /home/arezoo1/joshua-tutorial/runs/267/grammar.packed
  JOB FAILED (return code 1)
Exception in thread "main" java.util.NoSuchElementException
    at org.apache.joshua.util.io.LineReader.next(LineReader.java:276)
    at 
org.apache.joshua.tools.GrammarPacker.getGrammarReader(GrammarPacker.java:239)
    at org.apache.joshua.tools.GrammarPacker.pack(GrammarPacker.java:184)
    at org.apache.joshua.tools.GrammarPackerCli.run(GrammarPackerCli.java:120)
    at org.apache.joshua.tools.GrammarPackerCli.main(GrammarPackerCli.java:137)
* FATAL: Couldn't pack the grammar.
* Copying sorted grammars (/tmp/grammar.gzYYV8) to current directory.

 
 

    On Sunday, August 6, 2017 6:20 PM, Matt Post <p...@cs.jhu.edu> wrote:
 

 It looks like the alignments didn't combine, which probably means alignment 
failed, which probably means the binaries didn't build and aren't in 
$JOSHUA/bin. These are built as one of the preprocessing steps. Did you run 
download-deps.sh?
matt




On Aug 6, 2017, at 9:19 PM, Arezoo Arj <arezooarjom...@yahoo.com> wrote:

Hi
Thank you for your reply. I'll be really greatfull if you send me  Matt's email 
address? 
From: John Hewitt
Sent: ‎8/‎6/‎2017 11:21 PM
To: user@joshua.incubator.apache.org; Arezoo Arjomand
Subject: Re:

Hi Azeroo,
I'm replying to you and to the user@joshua mailing list. Matt is on this list, 
the old Google Group isn't used any more, and Hieu is not involved in Joshua 
development. 
Looks like the job died at

  cmd=rm -f alignments/0/corpus.0-0.*; /joshua/scripts/training/run- giza.pl 
--root-dir alignments/0 -e en -f es -corpus /home/arezoo1/joshua-tutorial/ 
runs/data/train/splits/0/ corpus -merge grow-diag-final  > 
alignments/0/giza.log 2>&1
  JOB FAILED (return code 127)


You'll note that stdout and stderr have both been piped to 
alignments/0/giza.log. I'd suggest looking there first; you might be able to 
figure out the issue based on the error log there. If not, please post its 
contents in a reply.
Could you let us know if you're using the 6.1 release?
-John


On Sun, Aug 6, 2017 at 7:01 AM, Arezoo Arjomand <arezooarjom...@yahoo.com> 
wrote:

I download  Apache Joshua (Incubating) and compile it successfully. but when i 
run it as the instruction https://cwiki.apache.org/ confluence/display/JOSHUA/ 
Joshua+Tutorial the following error is appeared.I'm really appreciate if you 
tell me how can i fix it.


arezoo1@arezoo1-X450CC:~/ joshua-tutorial/runs$ $JOSHUA/bin/pipeline.pl \ 
--rundir tessttt \
> --readme "Baseline Hiero run" \
> --source es \
> --target en \
> --type hiero \
> --corpus $FISHER/corpus/asr/fisher_ train \
> --tune $FISHER/corpus/asr/fisher_dev \
> --test $FISHER/corpus/asr/fisher_dev2 \
> --maxlen 11 \
> --maxlen-tune 11 \
> --maxlen-test 11 \
> --tuner-iterations 1 \
> --lm-order 3
[train-copy-and-filter] rebuilding...
  dep=/home/arezoo1/joshua- tutorial/fisher-callhome- 
corpus-master/corpus/asr/fishe r_train.es [CHANGED]
  dep=/home/arezoo1/joshua- tutorial/fisher-callhome- corpus-master/corpus/asr/ 
fisher_train.en [CHANGED]
  dep=/home/arezoo1/joshua- tutorial/runs/data/train/train .es [NOT FOUND]
  dep=/home/arezoo1/joshua- tutorial/runs/data/train/ train.en [NOT FOUND]
  cmd=/joshua/scripts/training/ paste <(cat /home/arezoo1/joshua-tutorial/ 
fisher-callhome-corpus-master/ corpus/asr/fisher_train.es) <(cat 
/home/arezoo1/joshua-tutorial/ fisher-callhome-corpus-master/ 
corpus/asr/fisher_train.en) | /joshua/scripts/training/filte r-empty-lines.pl | 
/joshua/scripts/support/ split2files /home/arezoo1/joshua-tutorial/ 
runs/data/train/train.es /home/arezoo1/joshua-tutorial/ runs/data/train/train.en
  took 1 seconds (1s)
[train-tokenize-es] rebuilding...
  dep=/home/arezoo1/joshua- tutorial/runs/data/train/train .es [CHANGED]
  dep=/home/arezoo1/joshua- tutorial/runs/data/train/train .tok.es [NOT FOUND]
  cmd=/joshua/scripts/training/ scat /home/arezoo1/joshua-tutorial/ 
runs/data/train/train.es | /joshua/scripts/preparation/no rmalize.pl es | 
/joshua/scripts/preparation/to kenize.pl -l es 2> /dev/null > 
/home/arezoo1/joshua-tutorial/ runs/data/train/train.tok.es
  took 7 seconds (7s)
[train-tokenize-en] rebuilding...
  dep=/home/arezoo1/joshua- tutorial/runs/data/train/ train.en [CHANGED]
  dep=/home/arezoo1/joshua- tutorial/runs/data/train/ train.tok.en [NOT FOUND]
  cmd=/joshua/scripts/training/ scat /home/arezoo1/joshua-tutorial/ 
runs/data/train/train.en | /joshua/scripts/preparation/no rmalize.pl en | 
/joshua/scripts/preparation/to kenize.pl -l en 2> /dev/null > 
/home/arezoo1/joshua-tutorial/ runs/data/train/train.tok.en
  took 9 seconds (9s)
[train-trim] rebuilding...
  dep=/home/arezoo1/joshua- tutorial/runs/data/train/train .tok.es [CHANGED]
  dep=/home/arezoo1/joshua- tutorial/runs/data/train/ train.tok.en [CHANGED]
  dep=/home/arezoo1/joshua- tutorial/runs/data/train/train .tok.11.es [NOT 
FOUND]
  dep=/home/arezoo1/joshua- tutorial/runs/data/train/ train.tok.11.en [NOT 
FOUND]
  cmd=/joshua/scripts/training/ paste /home/arezoo1/joshua-tutorial/ 
runs/data/train/train.tok.es /home/arezoo1/joshua-tutorial/ 
runs/data/train/train.tok.en | /joshua/scripts/training/trim_ 
parallel_corpus.pl 11 | /joshua/scripts/support/ split2files 
/home/arezoo1/joshua-tutorial/ runs/data/train/train.tok.11. es 
/home/arezoo1/joshua-tutorial/ runs/data/train/train.tok.11. en
  took 1 seconds (1s)
[train-lowercase-es] rebuilding...
  dep=/home/arezoo1/joshua- tutorial/runs/data/train/train .tok.11.es [CHANGED]
  dep=/home/arezoo1/joshua- tutorial/runs/data/train/train .tok.11.lc.es [NOT 
FOUND]
  cmd=cat /home/arezoo1/joshua-tutorial/ runs/data/train/train.tok.11. es | 
/joshua/scripts/preparation/lo wercase.pl > /home/arezoo1/joshua-tutorial/ 
runs/data/train/train.tok.11. lc.es
  took 0 seconds (0s)
[train-lowercase-en] rebuilding...
  dep=/home/arezoo1/joshua- tutorial/runs/data/train/ train.tok.11.en [CHANGED]
  dep=/home/arezoo1/joshua- tutorial/runs/data/train/ train.tok.11.lc.en [NOT 
FOUND]
  cmd=cat /home/arezoo1/joshua-tutorial/ runs/data/train/train.tok.11. en | 
/joshua/scripts/preparation/lo wercase.pl > /home/arezoo1/joshua-tutorial/ 
runs/data/train/train.tok.11. lc.en
  took 0 seconds (0s)
[train-vocab-es] rebuilding...
  dep=/home/arezoo1/joshua- tutorial/runs/data/train/corpu s.es [CHANGED]
  dep=/home/arezoo1/joshua- tutorial/runs/data/train/vocab .es [NOT FOUND]
  cmd=cat /home/arezoo1/joshua-tutorial/ runs/data/train/corpus.es | 
/joshua/scripts/training/build -vocab.pl > /home/arezoo1/joshua-tutorial/ 
runs/data/train/vocab.es
  took 1 seconds (1s)
[train-vocab-en] rebuilding...
  dep=/home/arezoo1/joshua- tutorial/runs/data/train/ corpus.en [CHANGED]
  dep=/home/arezoo1/joshua- tutorial/runs/data/train/ vocab.en [NOT FOUND]
  cmd=cat /home/arezoo1/joshua-tutorial/ runs/data/train/corpus.en | 
/joshua/scripts/training/build -vocab.pl > /home/arezoo1/joshua-tutorial/ 
runs/data/train/vocab.en
  took 0 seconds (0s)
[tune-copy-and-filter] rebuilding...
  dep=/home/arezoo1/joshua- tutorial/fisher-callhome- 
corpus-master/corpus/asr/fishe r_dev.es [CHANGED]
  dep=/home/arezoo1/joshua- tutorial/fisher-callhome- corpus-master/corpus/asr/ 
fisher_dev.en.0 [CHANGED]
  dep=/home/arezoo1/joshua- tutorial/fisher-callhome- corpus-master/corpus/asr/ 
fisher_dev.en.1 [CHANGED]
  dep=/home/arezoo1/joshua- tutorial/fisher-callhome- corpus-master/corpus/asr/ 
fisher_dev.en.2 [CHANGED]
  dep=/home/arezoo1/joshua- tutorial/fisher-callhome- corpus-master/corpus/asr/ 
fisher_dev.en.3 [CHANGED]
  dep=/home/arezoo1/joshua- tutorial/runs/data/tune/tune. es [NOT FOUND]
  dep=/home/arezoo1/joshua- tutorial/runs/data/tune/tune. en.0 [NOT FOUND]
  dep=/home/arezoo1/joshua- tutorial/runs/data/tune/tune. en.1 [NOT FOUND]
  dep=/home/arezoo1/joshua- tutorial/runs/data/tune/tune. en.2 [NOT FOUND]
  dep=/home/arezoo1/joshua- tutorial/runs/data/tune/tune. en.3 [NOT FOUND]
  cmd=/joshua/scripts/training/ paste <(cat /home/arezoo1/joshua-tutorial/ 
fisher-callhome-corpus-master/ corpus/asr/fisher_dev.es) <(cat 
/home/arezoo1/joshua-tutorial/ fisher-callhome-

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