We've found that Jung works very well and has been superior to Prefuse for our 
use.  Prefuse hasn't been under active development for a while whereas Jung is 
being actively maintained.  Some of the particularly attractive features of 
Jung are its ability to handle disconnected graphs (ie multiple root nodes) 
more easily than with Prefuse along with its many layout algorithms.

http://jung.sourceforge.net/

Thanks,
D


On Jan 1, 2010, at 7:03 PM, Todd Stavish wrote:

> Thanks Peter. Can anyone recommend any other java graph viz toolkits?
> 
> Regards,
> Todd
> 
> 
> 
> 
> 
> On Fri, Jan 1, 2010 at 5:17 PM, Peter Neubauer
> <[email protected]> wrote:
>> Todd,
>> has been a while since I played around with Prefuse for quite a while.
>> Last I checked it had no dynamic adding of more data, so you had to
>> read in the whole graph upfront, not suitable for bigger data sets -
>> but that might have changed?
>> 
>> Cheers,
>> 
>> /peter neubauer
>> 
>> COO and Sales, Neo Technology
>> 
>> GTalk:      neubauer.peter
>> Skype       peter.neubauer
>> Phone       +46 704 106975
>> LinkedIn   http://www.linkedin.com/in/neubauer
>> Twitter      http://twitter.com/peterneubauer
>> 
>> http://www.neo4j.org                - Relationships count.
>> http://gremlin.tinkerpop.com    - PageRank in 2 lines of code.
>> http://www.linkedprocess.org   - Computing at LinkedData scale.
>> 
>> 
>> 
>> On Fri, Jan 1, 2010 at 1:54 PM, Todd Stavish <[email protected]> wrote:
>>> In particular, how to use their graph reader class or custom mapping?
>>> 
>>> Thanks,
>>> Todd
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