On Thu, Jun 9, 2011 at 2:27 AM, Lance Norskog <[email protected]> wrote:
> Projecting to the first "two" singular vectors?

Yes.

> Do an SVD on a random matrix, and use the first 2 (or three) singular
> vectors as a matrix?

Not a random matrix.  A matrix of positions shifted back to have
average mean (aka PCA).

>
> What goes into the affinity matrix?

exp(-r_ij ^ 2 / \sigma) is a common usage.  sigma is chosen to have a
fairly sparse affinity matrix.  r_ij is distance from i to j.

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