Thanks, John and Sean, that clarifies things quite a bit.

On Wed, Aug 22, 2012 at 5:48 PM, John Conwell <[email protected]> wrote:
> I think the key point here is that these vectors should be logically
> thought of as sparse vectors (not sure how they are represented in Mahout).
>  If a value in the vector at some position i is empty, it is essentially
> not part of the calculation.  And only positions, i, that have a value in
> both vectors can be used as part of the calculation for the denominator.
>
> On Wed, Aug 22, 2012 at 2:41 PM, Sean Owen <[email protected]> wrote:
>
>> Depends a bit on what you mean in the example here -- are the 0 values
>> observed values, or "null", a lack of an observed value?
>>
>> If they are really 0, then the implementation will calculate the
>> values you listed. But I think you really mean the input is...
>>
>> v1=[1.0, 1.0, 1.0,   ]
>> v2=[     , 1.0, 1.0,   ]
>> v3=[1.0,   ,   ,   ]
>> v4=[1.0,1.0,1.0,1.0]
>> v5=[1.0,1.0,1.0,1.0]
>>
>> You can't assume the missing values are 0 in general. That may make
>> sense in some cases, but, for example, if your values are ratings on a
>> scale of 1 to 5 this amounts to assuming that all unrated items are
>> completely hated. The results will be nonsense.
>>
>> (Really this isn't the right example to truly illustrate that, try a
>> dummy data set pretending that these are 1- to 5-star movie ratings
>> and I think you'll see the similarities that result from assuming
>> they're 0 don't make intuitive sense.
>>
>> If you want this behavior, to assume null == 0, that's what the
>> PreferenceInferrer is for. You can inject any default you want, the
>> one that makes sense for the data set.
>>
>> On Wed, Aug 22, 2012 at 5:31 PM, Francis Kelly <[email protected]>
>> wrote:
>> > Thanks very much for you quick - I really appreciate it!
>> >
>> > My follow-up question is an attempt to better understand this choice
>> > of implementation.
>> >
>> > To take a concrete example, let's suppose that we have a system with 4
>> > users, so item vectors are 4 dimensional and we have the following 5
>> > vectors (I realize this is completely pathological example, but bear
>> > with me). We have:
>> >
>> > v1=[1.0, 1.0, 1.0, 0]
>> > v2=[0.0, 1.0, 1.0, 0]
>> > v3=[1.0, 0, 0, 0]
>> > v4=[1.0,1.0,1.0,1.0]
>> > v5=[1.0,1.0,1.0,1.0]
>> >
>> > As I understand it, then, in the definition of
>> > UncenteredCosineSimilarity, the Cosine Similarity between all of the
>> > above would be 1.0.
>> >
>> > Whereas in the "traditional" definition of Cosine Similarity, we'd
>> > have the following correlation values:
>> > cs(v1,v2)=0.816
>> > cs(v1,v3)=0.577
>> > cs(v1,v4)=0.866
>> > cs(v4,v5)=1.0
>> >
>> > Assuming I'm correct to this point, could you elaborate a little bit
>> > on the rationale behind this choice? It would seem to me that, for
>> > example, v1 and v2 are "more similar" (with 2 ratings in common) than
>> > v1 and v3 (with just 1 rating in common). But obviously, you've
>> > thought of already, so I'm curious to understand what I'm missing
>> > here. I'm guessing it has something to do with your comment that the
>> > calculation "is only going to make sense if the data indeed has a mean
>> > of zero by nature."
>> >
>> > Thanks for your time on this question and all of your efforts on
>> > Mahout -- it's a great project.
>> >
>> > best,
>> > Francis
>> >
>> > On Wed, Aug 22, 2012 at 5:11 PM, Sean Owen <[email protected]> wrote:
>> >> The similarity is only defined over the dimensions where both series
>> >> have a value, yes. So the denominator and numerator are equal in this
>> >> case, giving a cosine of 1, which is right in the sense that in 1D
>> >> space the cosine must be 1 or -1; two vectors can only point in
>> >> exactly the same or exactly opposite directions. The calculation
>> >> you're trying is equivalent to pretending that the dimensions with no
>> >> value have value 0.0. That is only going to make sense if the data
>> >> indeed has a mean of zero by nature.
>> >>
>> >> On Wed, Aug 22, 2012 at 12:27 PM, Francis Kelly <
>> [email protected]> wrote:
>> >>> I'm writing with a question about the UncenteredCosineSimilarity
>> >>> metric in Mahout 0.7 (in the context of a
>> >>> GenericItemBasedRecommender).
>> >>>
>> >>> I'm getting a correlation value that I don't understand and I'm hoping
>> >>> that someone can explain it to me.
>> >>>
>> >>> When I step through the code with a debugger, I find that when I'm
>> >>> comparing two items in AbstractItemSimilarity.com at lines 265-266, we
>> >>> have:
>> >>>
>> >>> PreferenceArray xPrefs = dataModel.getPreferencesForItem(itemID1);
>> >>> PreferenceArray yPrefs = dataModel.getPreferencesForItem(itemID2);
>> >>>
>> >>> Upon inspection, we see the following vectors:
>> >>>
>> >>> xPrefs=GenericItemPreferenceArray[itemID:6,{1=0.31,3=0.49,4=0.62}]
>> >>> yPrefs=GenericItemPreferenceArray[itemID:7,{2=0.43,4=0.21,5=0.52}].
>> >>>
>> >>> My understanding of the Cosine Similarity metric is that we take the
>> >>> dot product of the vectors and divide it by the product of the
>> >>> vectors' lengths. Assuming that's the case, we should have a
>> >>> denominator of 0.62 * 0.21 = 0.13 because the above vectors only
>> >>> overlap for userid=4. For the denominator -- and this is where the
>> >>> code is confusing me -- I would assume that we would have the product
>> >>> of the first vector length (sqrt(0.31^2 + 0.49^2 + 0.62^2) = 0.84) and
>> >>> the second (sqrt(0.43^2 + 0.21^2 + 0.52^2)= 0.70).
>> >>>
>> >>> The code, however, appears only to consider the places the vectors
>> >>> overlap (in other words, userid=4) to compute the lengths. Thus, when
>> >>> I find myself at line 332:
>> >>>
>> >>> result = computeResult(count, sumXY, sumX2, sumY2, sumXYdiff2);
>> >>>
>> >>> I find that sumX2 = 0.38 = 0.62^2 and sumY2 = 0.044 = 0.21^2. In other
>> >>> words, sumX2 only considers the value for userid=4 and, sumY2 only
>> >>> considers the value for userid=4 and not all values in each vector.
>> >>>
>> >>> And, indeed, following the code through the ultimate result it
>> >>> produces is a correlation value of 1.0 for these vectors: 0.62*0.21 /
>> >>> (sqrt(0.62^2)*sqrt(0.21^2)). I would have computed a correlation value
>> >>> of 0.13/(0.84 * 0.70) = 0.21. If someone could explain the discrepancy
>> >>> to me I'd be extremely grateful.
>> >>>
>> >>>
>> >>> Thanks in advance,
>> >>> Francis
>>
>
>
>
> --
>
> Thanks,
> John C

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