Hi Lalit,

Looks like this is the result of a tomcat shutdown, and is a probable race
condition bug in Zookeeper:

http://mail-archives.apache.org/mod_mbox/tomcat-users/201306.mbox/%[email protected]%3E

Karl


On Mon, Sep 15, 2014 at 9:41 AM, lalit jangra <[email protected]>
wrote:

> Hi Karl,
>
> Along with this, i could see below errors in tomcat catalina.out.
>
> Sep 15, 2014 1:06:14 PM org.apache.catalina.loader.WebappClassLoader
> loadClass
>
> INFO: Illegal access: this web application instance has been stopped
> already.  Could not load org.apache.zookeeper.server.ZooTrace.  The
> eventual following stack trace is caused by an error thrown for debugging
> purposes as well as to attempt to terminate the thread which caused the
> illegal access, and has no functional impact.
>
> java.lang.IllegalStateException
>
>         at
> org.apache.catalina.loader.WebappClassLoader.loadClass(WebappClassLoader.java:1612)
>
>         at
> org.apache.catalina.loader.WebappClassLoader.loadClass(WebappClassLoader.java:1571)
>
>         at
> org.apache.zookeeper.ClientCnxn$SendThread.run(ClientCnxn.java:1115)
>
>
>
> [http-bio-80-exec-1-SendThread(iwdc2preecma04.iwater.ie:2183)] ERROR
> org.apache.zookeeper.ClientCnxn - from http-bio-80-exec-1-SendThread(
> iwdc2preecma04.iwater.ie:2183)
>
> java.lang.NoClassDefFoundError: org/apache/zookeeper/server/ZooTrace
>
>         at
> org.apache.zookeeper.ClientCnxn$SendThread.run(ClientCnxn.java:1115)
>
> Caused by: java.lang.ClassNotFoundException:
> org.apache.zookeeper.server.ZooTrace
>
>         at
> org.apache.catalina.loader.WebappClassLoader.loadClass(WebappClassLoader.java:1720)
>
>         at
> org.apache.catalina.loader.WebappClassLoader.loadClass(WebappClassLoader.java:1571)
>
>         ... 1 more
>
> [http-bio-80-exec-1-SendThread(iwdc2preecma04.iwater.ie:2182)] ERROR
> org.apache.zookeeper.ClientCnxn - from http-bio-80-exec-1-SendThread(
> iwdc2preecma04.iwater.ie:2182)
>
> Sep 15, 2014 1:06:14 PM org.apache.coyote.AbstractProtocol destroy
>
> INFO: Destroying ProtocolHandler ["http-bio-80"]
>
> java.lang.NoClassDefFoundError: org/apache/zookeeper/server/ZooTrace
>
> Regards.
>
> On Mon, Sep 15, 2014 at 7:05 PM, lalit jangra <[email protected]>
> wrote:
>
>> Thanks Karl,
>>
>> While crawling is very slow, its taking long so a bit of frustrating and
>> as i have multiple high volume jobs that too in parallel, it does not seem
>> to be a good thing.
>>
>> I have also raised it on Zookeeper forums @
>> http://zookeeper-user.578899.n2.nabble.com/Getting-errors-in-zookeeper-logs-td7580260.html
>> but waiting for reply.
>>
>> Regards.
>>
>> On Mon, Sep 15, 2014 at 6:51 PM, Karl Wright <[email protected]> wrote:
>>
>>> HI Lalit,
>>>
>>> When MCF cannot reach zookeeper, MCF crawls will pause until the
>>> zookeeper connections are reestablished.  Then the crawls should resume.
>>> This should *not* abort your crawls, but it will make them very slow.
>>>
>>> I am not a zookeeper expert, so I would post on their message boards to
>>> see if there is any adjustment that can be made to zookeeper parameters
>>> that would improve zookeeper behavior when you have a flaky network.
>>> However, since the obvious solution is to fix your network, they may not
>>> have a code solution for you.
>>>
>>> Thanks,
>>> Karl
>>>
>>>
>>> On Mon, Sep 15, 2014 at 9:15 AM, lalit jangra <[email protected]>
>>> wrote:
>>>
>>>> Thanks Karl,
>>>>
>>>> Ideally resetting connections should be taken care by zookeeper itself
>>>> as i could see re-establishment of connections later in logs.
>>>>
>>>> Can you suggest any way to overcome this in addition to network issue
>>>> resolution as my crawls are not working again and again? Anything in config
>>>> files etc.?
>>>>
>>>> Regards.
>>>>
>>>>
>>>> On Mon, Sep 15, 2014 at 6:39 PM, Karl Wright <[email protected]>
>>>> wrote:
>>>>
>>>>> Hi Lalit,
>>>>>
>>>>> Zookeeper will keep working, but you should understand that you are
>>>>> dropping connections to your zookeeper members for unknown reasons, which
>>>>> is causing your crawl to stall when it happens.  This argues that perhaps
>>>>> you have some network flakiness of some kind.
>>>>>
>>>>> Karl
>>>>>
>>>>>
>>>>> On Mon, Sep 15, 2014 at 8:59 AM, lalit jangra <
>>>>> [email protected]> wrote:
>>>>>
>>>>>>
>>>>>> Hi,
>>>>>>
>>>>>> I am running cluster of two Apache ManifoldCF nodes on two separate
>>>>>> machines each of which having 3 zookeeper instances (total 6 instances in
>>>>>> cluster). When i am running up manifoldCF agents, i see below warning
>>>>>> during startup.
>>>>>>
>>>>>> [http-bio-80-exec-2-SendThread(iwdc1preecma03.iwater.ie:2181)] INFO
>>>>>> org.apache.zookeeper.ClientCnxn - Unable to read additional data from
>>>>>> server sessionid 0x0, likely server has closed socket, closing socket
>>>>>> connection and attempting reconnect
>>>>>>
>>>>>> [http-bio-80-exec-2-SendThread(iwdc2preecma04.iwater.ie:2182)] INFO
>>>>>> org.apache.zookeeper.ClientCnxn - Opening socket connection to server
>>>>>> iwdc2preecma04.iwater.ie/10.231.72.25:2182. Will not attempt to
>>>>>> authenticate using SASL (unknown error)
>>>>>>
>>>>>>
>>>>>> Also i could see below error in logs in while agents are running.
>>>>>>
>>>>>> [http-bio-80-exec-2] INFO org.apache.zookeeper.ZooKeeper - Initiating
>>>>>> client connection,
>>>>>> connectString=iwdc1preecma03:2181,iwdc1preecma03:2182,iwdc1preecma03:2183,iwdc2preecma04:2181,iwdc2preecma04:2182,iwdc2preecma04:2183
>>>>>> sessionTimeout=4000
>>>>>> watcher=org.apache.manifoldcf.core.lockmanager.ZooKeeperConnection$ZooKeeperWatcher@51d83fd7
>>>>>>
>>>>>> [http-bio-80-exec-2-SendThread(iwdc2preecma04.iwater.ie:2182)] INFO
>>>>>> org.apache.zookeeper.ClientCnxn - Opening socket connection to server
>>>>>> iwdc2preecma04.iwater.ie/10.231.72.25:2182. Will not attempt to
>>>>>> authenticate using SASL (unknown error)
>>>>>>
>>>>>> [http-bio-80-exec-2-SendThread(iwdc2preecma04.iwater.ie:2182)] INFO
>>>>>> org.apache.zookeeper.ClientCnxn - Socket connection established to
>>>>>> iwdc2preecma04.iwater.ie/10.231.72.25:2182, initiating session
>>>>>>
>>>>>> [http-bio-80-exec-2-SendThread(iwdc2preecma04.iwater.ie:2182)] WARN
>>>>>> org.apache.zookeeper.ClientCnxn - Session 0x0 for server
>>>>>> iwdc2preecma04.iwater.ie/10.231.72.25:2182, unexpected error,
>>>>>> closing socket connection and attempting reconnect
>>>>>>
>>>>>> java.io.IOException: Connection reset by peer
>>>>>>
>>>>>>         at sun.nio.ch.FileDispatcherImpl.read0(Native Method)
>>>>>>
>>>>>>         at sun.nio.ch.SocketDispatcher.read(SocketDispatcher.java:39)
>>>>>>
>>>>>>         at sun.nio.ch.IOUtil.readIntoNativeBuffer(IOUtil.java:225)
>>>>>>
>>>>>>         at sun.nio.ch.IOUtil.read(IOUtil.java:193)
>>>>>>
>>>>>>         at
>>>>>> sun.nio.ch.SocketChannelImpl.read(SocketChannelImpl.java:375)
>>>>>>
>>>>>>         at
>>>>>> org.apache.zookeeper.ClientCnxnSocketNIO.doIO(ClientCnxnSocketNIO.java:68)
>>>>>>
>>>>>>         at
>>>>>> org.apache.zookeeper.ClientCnxnSocketNIO.doTransport(ClientCnxnSocketNIO.java:355)
>>>>>>
>>>>>>         at
>>>>>> org.apache.zookeeper.ClientCnxn$SendThread.run(ClientCnxn.java:1068)
>>>>>>
>>>>>> [http-bio-80-exec-2-SendThread(iwdc2preecma04.iwater.ie:2183)] INFO
>>>>>> org.apache.zookeeper.ClientCnxn - Opening socket connection to server
>>>>>> iwdc2preecma04.iwater.ie/10.231.72.25:2183. Will not attempt to
>>>>>> authenticate using SASL (unknown error)
>>>>>>
>>>>>> [http-bio-80-exec-2-SendThread(iwdc2preecma04.iwater.ie:2183)] INFO
>>>>>> org.apache.zookeeper.ClientCnxn - Socket connection established to
>>>>>> iwdc2preecma04.iwater.ie/10.231.72.25:2183, initiating session
>>>>>>
>>>>>> [http-bio-80-exec-2-SendThread(iwdc2preecma04.iwater.ie:2183)] INFO
>>>>>> org.apache.zookeeper.ClientCnxn - Session establishment complete on 
>>>>>> server
>>>>>> iwdc2preecma04.iwater.ie/10.231.72.25:2183, sessionid =
>>>>>> 0x6487851bd330078, negotiated timeout = 4000
>>>>>>
>>>>>>
>>>>>> Below are configurations for 1. zookeeper nodes & 2. MCF nodes for
>>>>>> zookeeper.
>>>>>>
>>>>>>
>>>>>> *zoo.cfg :  Same for all six zookeeper nodes.*
>>>>>>
>>>>>>
>>>>>> # The number of milliseconds of each tick
>>>>>>
>>>>>> tickTime=2000
>>>>>>
>>>>>> dataDir=/app/IW/zookeeper/data/data.1
>>>>>>
>>>>>> dataLogDir=/app/IW/zookeeper/logs/log.1
>>>>>>
>>>>>> clientPort=2181
>>>>>>
>>>>>> server.1=iwdc1preecma03:2888:3888
>>>>>>
>>>>>> server.2=iwdc1preecma03:2889:3889
>>>>>>
>>>>>> server.3=iwdc1preecma03:2890:3890
>>>>>>
>>>>>> server.4=iwdc2preecma04:2891:3891
>>>>>>
>>>>>> server.5=iwdc2preecma04:2892:3892
>>>>>>
>>>>>> server.6=iwdc2preecma04:2893:3893
>>>>>>
>>>>>> # The number of ticks that the initial
>>>>>>
>>>>>> # synchronization phase can take
>>>>>>
>>>>>> initLimit=10
>>>>>>
>>>>>> # The number of ticks that can pass between
>>>>>>
>>>>>> # sending a request and getting an acknowledgement
>>>>>>
>>>>>> syncLimit=5
>>>>>>
>>>>>> # the directory where the snapshot is stored.
>>>>>>
>>>>>> # do not use /tmp for storage, /tmp here is just
>>>>>>
>>>>>> # example sakes.
>>>>>>
>>>>>> #dataDir=/tmp/zookeeper
>>>>>>
>>>>>> # the port at which the clients will connect
>>>>>>
>>>>>> #clientPort=2181
>>>>>>
>>>>>> # the maximum number of client connections.
>>>>>>
>>>>>> # increase this if you need to handle more clients
>>>>>>
>>>>>> #maxClientCnxns=60
>>>>>>
>>>>>> #
>>>>>>
>>>>>> # Be sure to read the maintenance section of the
>>>>>>
>>>>>> # administrator guide before turning on autopurge.
>>>>>>
>>>>>> #
>>>>>>
>>>>>> #
>>>>>> http://zookeeper.apache.org/doc/current/zookeeperAdmin.html#sc_maintenance
>>>>>>
>>>>>> #
>>>>>>
>>>>>> # The number of snapshots to retain in dataDir
>>>>>>
>>>>>> autopurge.snapRetainCount=3
>>>>>>
>>>>>> # Purge task interval in hours
>>>>>>
>>>>>> # Set to "0" to disable auto purge feature
>>>>>>
>>>>>> autopurge.purgeInterval=1
>>>>>>
>>>>>>
>>>>>>
>>>>>> *ManifoldCF configurations : same for both ManifoldCF nodes.*
>>>>>>
>>>>>>
>>>>>> <property name="org.apache.manifoldcf.lockmanagerclass"
>>>>>> value="org.apache.manifoldcf.core.lockmanager.ZooKeeperLockManager"/>
>>>>>>
>>>>>>   <property name="org.apache.manifoldcf.zookeeper.connectstring"
>>>>>> value="iwdc1preecma03:2181,iwdc1preecma03:2182,iwdc1preecma03:2183,iwdc2preecma04:2181,iwdc2preecma04:2182,iwdc2preecma04:2183"/>
>>>>>>
>>>>>> <property name="org.apache.manifoldcf.zookeeper.sessiontimeout"
>>>>>> value="4000"/>
>>>>>>
>>>>>>
>>>>>>
>>>>>> *I want to know if due to above warnings/errors, will zookeeper stop
>>>>>> working or will zookeeper will work and these are non-failing messages,
>>>>>> because ManifoldCF jobs are stuck while i can see these errors.*
>>>>>>
>>>>>> Please suggest.
>>>>>>
>>>>>> Regards,
>>>>>> Lalit.
>>>>>>
>>>>>>
>>>>>
>>>>
>>>>
>>>> --
>>>> Regards,
>>>> Lalit.
>>>>
>>>
>>>
>>
>>
>> --
>> Regards,
>> Lalit.
>>
>
>
>
> --
> Regards,
> Lalit.
>

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