I add the fields also using a simple indexing filter plugin. In the filter method of my HtmlParseFilter plugin implementation I add data extracted from the page to the metadata using ParseResult.put method. Logging the metadata shows that it is added correctly. However in the implementation of my IndexingFilter the metadata does not contain multi value fields, the other fields I added are present. So therefore in the indexer I cannot add the fields to the document and therefore add them to Solr. What code between parsing and indexing can remove the multi-value fields from the metadata?
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