What is the effect of clearing out the entire storm.local.dir directory?

I tried to upgrade from 0.9.4 to 0.9.5 but it seems like things are running
half in the old dir and half in the new dir. Not sure how to resolve this.
Was wondering if deleting the local storm dir would affect my current bolts
and spouts?  There is another server somewhere for the devs that are
running their topololgies. I don't know much about storm development yet.

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