I am running a pipeline using the CPE gui. One of my annotators is written in perl and the rest are in java. Frequently (but not every time) when I run the pipeline I get an error message "WARNING: ThreadAnnotator worker thread not ready!" and the cpe gui stays in the "Initializing" stage indefinitely. This only happens when there is a non-java annotator in the pipeline.
Has anyone seen this and is there a fix/workaround for it? Thanks. Edward.
