I was referring to the "aLenient" parameter on the XmiCasDeserializer 
which defaults to false..which implies that an exception WOULD be thrown 
if there was a type system mismatch.  This default I would equate to the 
config parm FailOnUnknownType being set to TRUE.  However, you said 
FailOnUnknownType was set to false which implies to me that it would 
silently ignore mismatches. Having said that,  I'm not sure how these two 
values affect each other, if at all.

Here's the description of the XmiCasDeserializer method I'm talking about.

static void deserialize(InputStream aStream, CAS aCAS, boolean aLenient) 
          Deserializes a CAS from XMI. 
aStream - input stream from which to read the XCMI document
aCAS - CAS into which to deserialize. This CAS must be set up with a type 
system that is compatible with that in the XMI
aLenient - if true, unknown Types will be ignored. If false, unknown Types 
will cause an exception. The default is false. 


Joel Dubbels
Senior Software Engineer | Software Group
email: [email protected] | Tel: 507-253-1165










From:
"Coarr, Matt" <[email protected]>
To:
"[email protected]" <[email protected]>
Cc:
"Wellner, Benjamin R." <[email protected]>
Date:
01/18/2012 07:44 AM
Subject:
Re: question about annotation not being loaded



Thanks for the idea.  Are you talking about the FailOnUnknownType config 
param?  It is set to false (as you said was default).

Matt

From: Joel Dubbels <[email protected]<mailto:[email protected]>>
Reply-To: <[email protected]<mailto:[email protected]>>
Date: Tue, 17 Jan 2012 17:11:06 -0600
To: <[email protected]<mailto:[email protected]>>
Cc: "[email protected]<mailto:[email protected]>" 
<[email protected]<mailto:[email protected]>>, "Wellner, Benjamin 
R." <[email protected]<mailto:[email protected]>>
Subject: Re: question about annotation not being loaded


I don't know if this is it, but I'll offer it up just in case......could 
it be a type system mismatch?   I've had problems in the past where I've 
deserialized CASes and the deserializer was set to "lenient" (which would 
only pull in the types the deserializer recognizes and ignores all 
others).  The default for the XmiCasDeserializer is lenient=false, so, by 
default it should throw an exception if something mismatches.
________________________________

Joel Dubbels
Senior Software Engineer | Software Group
email: [email protected]<mailto:[email protected]> | Tel: 507-253-1165
[cid:_1_0C3FE8300C3FE45C007F5C7C86257988]

[cid:_1_0C3FD6DC0C3FD308007F5C7C86257988]
________________________________





From:   "Coarr, Matt" <[email protected]<mailto:[email protected]>>
To:     "[email protected]<mailto:[email protected]>" 
<[email protected]<mailto:[email protected]>>
Cc:     "Wellner, Benjamin R." <[email protected]<mailto:[email protected]
>>
Date:   01/17/2012 04:27 PM
Subject:        question about annotation not being loaded

________________________________



Hello,

We normally use the FileSystemCollectionReader to load in plain text 
files. This collection reader populates an annotation in the example 
namespace called SourceDocumentInformation (that has a uri that includes 
the full path to the original file).

For some testing, we have a group of generated test xmi files that will be 
used as input.  For this test pipeline we have a new CPE config that uses 
the XmiCollectionReader.  In general this is working great!  We get most 
of our saved annotations loaded into the CAS and everything works great!

The problem we're having is that we've added the 
examples:SourceDocumentInformation annotation to the input test documents 
(xmi docs) along with the required xml namespace declaration 
(xmlns:examples="http:///org/apache/uima/examples.ecore";).  Here's a 
sample (I've replace the real filename and input size with dummy data):

<examples:SourceDocumentInformation xmi:id="10" sofa="1" begin="0" end="0" 
uri="file:/tmp/myfiles/0123.xmi" offsetInSource="0" documentSize="1234" 
lastSegment="false"/>

However, this annotation isn't getting loaded.  We can't see the valuein 
our analysis engine, and we're writing these files out at the end with the 
example xmi writer and the SourceDocumentInformation annotation 
doesn'tshow up in the output xmi files.  So it appears that this 
annotation isn't being loaded or it's being filtered out.

No errors show up either.

Any ideas?  Has anyone run into this before?

Thanks!
Matt




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