Hi,
sorry for the delayed response, I was travelling for the last few days. I made too many assumptions in my last mail. I have hardly any experience with sbt and no experience at all with Java Play applications. I will take a close look today and will get back to you with more information. Best, Peter Am 11.11.2016 um 13:11 schrieb Ingo Glaser: > Actually the last email did not formate properly, hence I just wanted to > rewrite the part about the directory structure: > > _APP_TypeSystem.xml is stored in the following path relative to the project > root /app/informationExtraction/appTypes/ > > Hey again me, > > Furthermore I do have a directory /app/rutaComponents with the following > content > > — ./descritor (Fixed descriptors) > — ./generatedComponents (Dynamic components) with following content > —— ./descriptor > — — ./resources > — — ./script > — ./resources > — ./script (Fixed scripts) > — ./scriptImporter (Importer for dynamic and new scripts) > > With the script importer, I can import scripts from > /app/rutaComponents/generatedComponents/script in order to create a > descriptor in ./generatedComponents/descriptor > > > Again sorry for the inappropriate formation! > > Best, > Ingo > > >> On 11 Nov 2016, at 13:04, Ingo Glaser <[email protected]> wrote: >> >> Hi Peter, >> >> I figured that even when using version 2.5.0, importByLocation is default >> for me. I did debug it as well as the import tags in the created .xml files >> do have an attribute location. >> >> When I was previously talking about the error, this happened during >> executing one of my pipelines. Therefore I’ve used some previously created >> descriptors, they did work in version 2.3.0 though. These descriptors are >> based on ruta scripts, which do not change anymore. However, I’ve also the >> option to create (or update) a ruta script manually and then using the >> application in order to create the proper descriptor in xml. The weird thing >> I’ve just noticed is, when creating the .xml descriptor from my ruta script, >> the (or an) error already occurred when using version 2.3.0, however, the >> process of creating the .xml descriptor did not abort. When using version >> 2.5.0 the creation process does abort though. Either way, the pipeline with >> version 2.5.0 does not work. When running my pipeline, either with the newly >> created descriptors (where the error occurs during creation) or with the >> existing ones, the process is aborted with the error from my first message. >> >> The error I show you below, actually occurs when running my importer. Hence >> I also add the importer. The previous error, as already mentioned actually >> occurred when running my pipeline and thus using the fixed created >> descriptor. So for now I think it makes more sense, to first solve the >> problem with creating the descriptor from my ruta scripts. I think >> afterwards I can solve the other issue as well, since they somehow relate to >> each other. >> >> Below I’d like to give you some more information, also according to your >> request: >> >> The _APP_TypeSystem.xml is stored in the following path relative to the >> project root /app/informationExtraction/appTypes/ >> Furthermore I do have a directory /app/rutaComponents with the following >> content >> ./descriptor (Fixed descriptors) >> ./generatedComponents (Dynamic components) >> ./descriptor >> ./resources >> ./script >> ./resources >> ./script (Fixed scripts) >> ./scriptImporter (Importer for dynamic and new scripts) >> With the script importer, I can import scripts from >> ./generatedComponents/script in order to create a descriptor in >> ./generatedComponents/descriptor >> >> - Complete error: >> >> org.apache.uima.ruta.extensions.RutaParseRuntimeException: >> org.apache.uima.ruta.extensions.RutaParseRuntimeException: >> org.apache.uima.ruta.extensions.RutaParseRuntimeException: >> org.apache.uima.ruta.extensions.RutaParseRuntimeException: >> java.lang.RuntimeException: Cannot resolve imports in _APP_TypeSystem >> at >> org.apache.uima.ruta.parser.RutaParser.emitErrorMessage(RutaParser.java:397) >> at >> org.apache.uima.ruta.parser.RutaParser.file_input(RutaParser.java:733) >> at >> org.apache.uima.ruta.descriptor.RutaDescriptorFactory.parseDescriptorInformation(RutaDescriptorFactory.java:146) >> at >> rutaComponents.scriptImporter.RutaComponentGenerator.generate(RutaComponentGenerator.java:79) >> at controllers.RutaController.saveRutaFile(RutaController.java:91) >> at >> Routes$$anonfun$routes$1$$anonfun$applyOrElse$82$$anonfun$apply$82.apply(routes_routing.scala:1494) >> at >> Routes$$anonfun$routes$1$$anonfun$applyOrElse$82$$anonfun$apply$82.apply(routes_routing.scala:1494) >> at >> play.core.Router$HandlerInvokerFactory$$anon$4.resultCall(Router.scala:264) >> at >> play.core.Router$HandlerInvokerFactory$JavaActionInvokerFactory$$anon$15$$anon$1.invocation(Router.scala:255) >> at play.core.j.JavaAction$$anon$1.call(JavaAction.scala:55) >> at play.GlobalSettings$1.call(GlobalSettings.java:67) >> at play.core.j.JavaAction$$anonfun$11.apply(JavaAction.scala:82) >> at play.core.j.JavaAction$$anonfun$11.apply(JavaAction.scala:82) >> at >> scala.concurrent.impl.Future$PromiseCompletingRunnable.liftedTree1$1(Future.scala:24) >> at >> scala.concurrent.impl.Future$PromiseCompletingRunnable.run(Future.scala:24) >> at >> play.core.j.HttpExecutionContext$$anon$2.run(HttpExecutionContext.scala:40) >> at >> play.api.libs.iteratee.Execution$trampoline$.execute(Execution.scala:46) >> at >> play.core.j.HttpExecutionContext.execute(HttpExecutionContext.scala:32) >> at scala.concurrent.impl.Future$.apply(Future.scala:31) >> at scala.concurrent.Future$.apply(Future.scala:485) >> at play.core.j.JavaAction$class.apply(JavaAction.scala:82) >> at >> play.core.Router$HandlerInvokerFactory$JavaActionInvokerFactory$$anon$15$$anon$1.apply(Router.scala:252) >> at >> play.api.mvc.Action$$anonfun$apply$1$$anonfun$apply$4$$anonfun$apply$5.apply(Action.scala:130) >> at >> play.api.mvc.Action$$anonfun$apply$1$$anonfun$apply$4$$anonfun$apply$5.apply(Action.scala:130) >> at play.utils.Threads$.withContextClassLoader(Threads.scala:21) >> at >> play.api.mvc.Action$$anonfun$apply$1$$anonfun$apply$4.apply(Action.scala:129) >> at >> play.api.mvc.Action$$anonfun$apply$1$$anonfun$apply$4.apply(Action.scala:128) >> at scala.Option.map(Option.scala:145) >> at play.api.mvc.Action$$anonfun$apply$1.apply(Action.scala:128) >> at play.api.mvc.Action$$anonfun$apply$1.apply(Action.scala:121) >> at >> play.api.libs.iteratee.Iteratee$$anonfun$mapM$1.apply(Iteratee.scala:483) >> at >> play.api.libs.iteratee.Iteratee$$anonfun$mapM$1.apply(Iteratee.scala:483) >> at >> play.api.libs.iteratee.Iteratee$$anonfun$flatMapM$1.apply(Iteratee.scala:519) >> at >> play.api.libs.iteratee.Iteratee$$anonfun$flatMapM$1.apply(Iteratee.scala:519) >> at >> play.api.libs.iteratee.Iteratee$$anonfun$flatMap$1$$anonfun$apply$14.apply(Iteratee.scala:496) >> at >> play.api.libs.iteratee.Iteratee$$anonfun$flatMap$1$$anonfun$apply$14.apply(Iteratee.scala:496) >> at >> scala.concurrent.impl.Future$PromiseCompletingRunnable.liftedTree1$1(Future.scala:24) >> at >> scala.concurrent.impl.Future$PromiseCompletingRunnable.run(Future.scala:24) >> at akka.dispatch.TaskInvocation.run(AbstractDispatcher.scala:41) >> at >> akka.dispatch.ForkJoinExecutorConfigurator$AkkaForkJoinTask.exec(AbstractDispatcher.scala:393) >> at scala.concurrent.forkjoin.ForkJoinTask.doExec(ForkJoinTask.java:260) >> at >> scala.concurrent.forkjoin.ForkJoinPool$WorkQueue.runTask(ForkJoinPool.java:1339) >> at >> scala.concurrent.forkjoin.ForkJoinPool.runWorker(ForkJoinPool.java:1979) >> at >> scala.concurrent.forkjoin.ForkJoinWorkerThread.run(ForkJoinWorkerThread.java:107) >> Caused by: org.apache.uima.ruta.extensions.RutaParseRuntimeException: >> org.apache.uima.ruta.extensions.RutaParseRuntimeException: >> org.apache.uima.ruta.extensions.RutaParseRuntimeException: >> java.lang.RuntimeException: Cannot resolve imports in _APP_TypeSystem >> at >> org.apache.uima.ruta.parser.RutaParser.emitErrorMessage(RutaParser.java:397) >> at >> org.apache.uima.ruta.parser.RutaParser.globalStatements(RutaParser.java:891) >> at >> org.apache.uima.ruta.parser.RutaParser.file_input(RutaParser.java:714) >> ... 42 more >> Caused by: org.apache.uima.ruta.extensions.RutaParseRuntimeException: >> org.apache.uima.ruta.extensions.RutaParseRuntimeException: >> java.lang.RuntimeException: Cannot resolve imports in _APP_TypeSystem >> at >> org.apache.uima.ruta.parser.RutaParser.emitErrorMessage(RutaParser.java:397) >> at >> org.apache.uima.ruta.parser.RutaParser.globalStatement(RutaParser.java:929) >> at >> org.apache.uima.ruta.parser.RutaParser.globalStatements(RutaParser.java:870) >> ... 43 more >> Caused by: org.apache.uima.ruta.extensions.RutaParseRuntimeException: >> java.lang.RuntimeException: Cannot resolve imports in _APP_TypeSystem >> at >> org.apache.uima.ruta.parser.RutaParser.emitErrorMessage(RutaParser.java:397) >> at >> org.apache.uima.ruta.parser.RutaParser.importStatement(RutaParser.java:2609) >> at >> org.apache.uima.ruta.parser.RutaParser.globalStatement(RutaParser.java:916) >> ... 44 more >> Caused by: java.lang.RuntimeException: Cannot resolve imports in >> _APP_TypeSystem >> at >> org.apache.uima.ruta.RutaEnvironment.importPackageFromTypeSystem(RutaEnvironment.java:594) >> at >> org.apache.uima.ruta.parser.RutaParser.importPackage(RutaParser.java:548) >> at >> org.apache.uima.ruta.parser.RutaParser.importStatement(RutaParser.java:2565) >> ... 45 more >> Caused by: org.apache.uima.util.InvalidXMLException: An import could not be >> resolved. No file with name "_APP_TypeSystem.xml" was found in the class >> path or data path. (Descriptor: <unknown>) >> at >> org.apache.uima.resource.metadata.impl.Import_impl.findAbsoluteUrl(Import_impl.java:122) >> at >> org.apache.uima.resource.metadata.impl.TypeSystemDescription_impl.resolveImports(TypeSystemDescription_impl.java:230) >> at >> org.apache.uima.resource.metadata.impl.TypeSystemDescription_impl.resolveImports(TypeSystemDescription_impl.java:210) >> at >> org.apache.uima.ruta.RutaEnvironment.importPackageFromTypeSystem(RutaEnvironment.java:592) >> ... 47 more >> >> - This is the relevant code of the importer: >> >> public class RutaComponentGenerator { >> >> public static String GENERATED_COMPONENTS_PATH = "app" + File.separator + >> "rutaComponents" + File.separator + "generatedComponents" + File.separator; >> >> /** >> * The path where the script will be written >> **/ >> public static String SCRIPT_OUTPUT_PATH = GENERATED_COMPONENTS_PATH + >> "script" + File.separator; >> >> /** >> * The path where the generated *TypeSystem.xml will be written >> **/ >> private File typeSystemOutputDirectory = new >> File(GENERATED_COMPONENTS_PATH + "descriptor"); >> >> /** >> * The path where the generated *Engine.xml will be written >> **/ >> private File analysisEngineOutputDirectory = new >> File(GENERATED_COMPONENTS_PATH + "descriptor"); >> >> // The paths where other relevant scripts descriptors, and resources are >> private String[] scriptPaths = new String[]{"app" + File.separator + >> "rutaComponents" + File.separator + "script", GENERATED_COMPONENTS_PATH + >> "script"}; >> private String[] descriptorPaths = new String[]{"app" + File.separator + >> "rutaComponents" + File.separator + "descriptor", GENERATED_COMPONENTS_PATH >> + "descriptor", "app" + File.separator + "informationExtraction" + >> File.separator + "lexiaTypes"}; >> private String[] resourcePaths = new String[]{"app" + File.separator + >> "rutaComponents" + File.separator + "resources", GENERATED_COMPONENTS_PATH + >> "resources"}; >> >> /** >> * Prepares Generates the XML files needed for the AnalysisEngine and the >> TypeSystem of the new RUTA component >> * >> * @param scriptName The file name of the script for which the >> RUTA-component shall be generated >> */ >> public void generate(String scriptName) { >> >> if (!typeSystemOutputDirectory.exists()) { >> typeSystemOutputDirectory.mkdirs(); >> } >> if (!analysisEngineOutputDirectory.exists()) { >> analysisEngineOutputDirectory.mkdirs(); >> } >> >> RutaDescriptorFactory factory = null; >> try { >> factory = new RutaDescriptorFactory("app" + File.separator + >> "rutaComponents" + File.separator + "descriptor" + File.separator + >> "BasicTypeSystem.xml", "app" + File.separator + "rutaComponents" + >> File.separator + "descriptor" + File.separator + "BasicEngine.xml"); >> } catch (MalformedURLException e) { >> e.printStackTrace(); >> } >> >> RutaBuildOptions options = new RutaBuildOptions(); >> options.setEncoding("UTF-8"); >> options.setResolveImports(true); >> >> // ToDo: Ensure that Mercurial-controlled scripts can't be rebuilt >> with this mechanism (for security reasons) >> // ToDo: Ensure that the filename is unique for all scripts >> File scriptToBuild = new File(SCRIPT_OUTPUT_PATH + scriptName + >> ".ruta"); >> >> try { >> RutaDescriptorInformation descriptorInformation = >> factory.parseDescriptorInformation(scriptToBuild, options); >> String packageString = ""; >> >> String engineOutput = new File(analysisEngineOutputDirectory, >> packageString + descriptorInformation.getScriptName() + >> options.getAnalysisEngineSuffix() + ".xml").getAbsolutePath(); >> >> String typeSystemOutput = new File(typeSystemOutputDirectory, >> packageString + descriptorInformation.getScriptName() + >> options.getTypeSystemSuffix() + ".xml").getAbsolutePath(); >> >> Pair<AnalysisEngineDescription, TypeSystemDescription> >> descriptions = factory.createDescriptions(engineOutput, typeSystemOutput, >> descriptorInformation, options, scriptPaths, descriptorPaths, resourcePaths); >> >> write(descriptions.getKey(), engineOutput); >> write(descriptions.getValue(), typeSystemOutput); >> } catch (RecognitionException re) { >> System.err.println("Failed to parse UIMA Ruta script file: " + >> scriptToBuild.getAbsolutePath()); >> re.printStackTrace(); >> } catch (IOException ioe) { >> System.err.println("Failed to load UIMA Ruta script file: " + >> scriptToBuild.getAbsolutePath()); >> ioe.printStackTrace(); >> } catch (Exception e) { >> e.printStackTrace(); >> } >> } >> >> private void write(XMLizable desc, String aFilename) throws SAXException, >> IOException { >> OutputStream os = null; >> try { >> File out = new File(aFilename); >> out.getParentFile().mkdirs(); >> os = new FileOutputStream(out); >> Logger.info("Debug info: Writing descriptor to: " + out); >> desc.toXML(os); >> } finally { >> IOUtils.closeQuietly(os); >> } >> } >> } >> - Again some sample imports I’m using: >> >> // Import types >> IMPORT PACKAGE de.tudarmstadt.ukp.dkpro.core.api.lexmorph.type.pos FROM >> _LEXIA_TypeSystem AS pos; >> >> I’d really appreciate any help and thanks so much in advance! >> >> Best, >> Ingo >>> On 10 Nov 2016, at 16:33, Peter Klügl <[email protected]> wrote: >>> >>> Hi, >>> >>> this should work just like in 2.3.0. However, there are some changes >>> (and a bug concerning the datapath). >>> >>> I assume that you use the ruta-maven-plugin to create the descriptors? >>> Did you use import-by-location before? I think the default changed to >>> import-by-name. >>> >>> <importByName>true</importByName> >>> >>> You can switch the import back to import-by-location in the plugin >>> configuration (set it to false), but I rather recommend to use >>> import-by-name in maven built projects. >>> In order to do this, you best place the type system descriptor in the >>> classpath. If you do not want to refer to the type system with package, >>> place it directly in the classpath root, e.g., in src/main/resources. >>> >>> In case of a DKPro Core type system, add the artifact as a dependency if >>> not done yet and change your import to: >>> >>> IMPORT PACKAGE de.tudarmstadt.ukp.dkpro.core.api.lexmorph.type.pos FROM >>> desc.type.POS AS pos; >>> >>> Then, you do not need to copy anything since the typesystem is directly >>> loaded from the dependency (the jar in the m2 repo). >>> >>> btw, there is an up-to-date example project for the integration of DKPro >>> Core in Ruta scripts: >>> https://github.com/pkluegl/ruta/tree/master/ruta-german-novel-with-dkpro >>> >>> In case this did not solve your problem: How did you import the >>> typesystem before? >>> - Is the type system located in the root of the classpath? >>> - Did you specify descriptorPaths in the configuration parameters? >>> - Have you set the datapath? >>> >>> Best, >>> >>> Peter >>> >>> >>> Am 10.11.2016 um 15:57 schrieb Ingo Glaser: >>>> Hey guys, >>>> >>>> I recently updated from Apache UIMA Ruta version 2.3.0 to 2.5.0. However, >>>> after the upgrade, my application does not run anymore, due to some error >>>> in the ruta scripts. I get the following error: >>>> >>>> Caused by: org.apache.uima.util.InvalidXMLException: An import could not >>>> be resolved. No file with name "_APP_TypeSystem.xml" was found in the >>>> class path or data path. (Descriptor: <unknown>) >>>> at >>>> org.apache.uima.resource.metadata.impl.Import_impl.findAbsoluteUrl(Import_impl.java:115) >>>> at >>>> org.apache.uima.resource.metadata.impl.TypeSystemDescription_impl.resolveImports(TypeSystemDescription_impl.java:228) >>>> at >>>> org.apache.uima.resource.metadata.impl.TypeSystemDescription_impl.resolveImports(TypeSystemDescription_impl.java:208) >>>> at >>>> org.apache.uima.ruta.RutaEnvironment.importPackageFromTypeSystem(RutaEnvironment.java:592) >>>> ... 67 more >>>> I assume that's because of the import within my ruta script. Do you have >>>> any idea, if and how the way we import something in a script has changed >>>> from version 2.3 to 2.5? >>>> >>>> I do import like this: >>>> >>>> IMPORT PACKAGE de.tudarmstadt.ukp.dkpro.core.api.lexmorph.type.pos FROM >>>> _APP_TypeSystem AS pos; >>>> >>>> Thanks already in advance for your help! >>>> >>>> >>>> >>>>
