Hi Spiros, Can you please describe what issues do you see when creating an experiment? Are you also trying to use a local Airavata instance? If not, we need to make sure the IP Address you have installed is unblocked to talk to the demo Airavata instance which powers the test-drive.airavata.org <http://test-drive.airavata.org/>.
May be Nipurn (cc’ed) can get in touch with you in Airavata Instant Messenger - https://airavata.hipchat.com/chat <https://airavata.hipchat.com/chat> This is a hip chat, it might ask you to sign up, if you prefer to login as guest user, you can try this - https://www.hipchat.com/gkzJyHoot <https://www.hipchat.com/gkzJyHoot> Suresh Can you please > On Feb 17, 2015, at 1:49 PM, Mihalakopoulos, Spiro > <[email protected]> wrote: > > Hi Suresh and all, > > I’ve installed Laravel and got the code from github, but can still only > create and search Projects and Experiments. > > I think I need a user with admin privileges to be able to create Computer > Resources, Applications… etc., and can’t seem to find how to do that. > > Thanks, > Spiros > > > From: Mihalakopoulos, Spiro [mailto:[email protected]] > Sent: Thursday, February 12, 2015 1:02 PM > To: [email protected] > Cc: Spiro Mihalakopoulos; Nipurn Doshi > Subject: RE: New Use Case and output file question > > Ok! Yes, thanks for the links Suresh. > > > From: Suresh Marru [mailto:[email protected] <mailto:[email protected]>] > Sent: Thursday, February 12, 2015 12:58 PM > To: [email protected] <mailto:[email protected]> > Cc: Spiro Mihalakopoulos; Nipurn Doshi > Subject: Re: New Use Case and output file question > > Hi Spiros, > > Please use this version of the PHP Reference Gateway - > https://github.com/SciGaP/laravel-pga <https://github.com/SciGaP/laravel-pga> > > This version uses a php framework called Laravel, so you may want to make > sure you followed the pre-requisist steps listed at - > http://laravel.com/docs/5.0#install-laravel > <http://laravel.com/docs/5.0#install-laravel> > > Suresh > > On Feb 11, 2015, at 9:51 AM, Mihalakopoulos, Spiro > <[email protected] > <mailto:[email protected]>> wrote: > > Hi all, > > This email is to say hi and to let you know that we at Umass Med School have > decided to use Airavata as a framework for building a Gateway to our cluster. > I am employed as an HPC Scientific Programmer and will be leading (and > probably doing it mostly myself J) this project. If you want more details > regarding our plans, please let me know, since I don’t want to bore you with > the details in this first email. > > I also have a technical question. I’ve added simple applications, along the > lines of Add, Echo, Multiply … etc. without a problem. I’ve also added an > application that takes an input file as an InputDataObjectType of type > DataType.URI. However, I must be doing something wrong when trying to > generate output files i.e., OutputDataObjectType of type DataType.URI. > > RegisterSampleApplicationsUtils.createAppOutput("output_file", "", > DataType.URI); > > It seems to work fine with strings still, since if in my script I put > something like this: > > echo > "output_file='file://localhost:///opt/lampp/htdocs/PHP-Reference-Gateway/experimentData/spiros340e527dece195a74ac7455fbcc6f6fa/spiros_c.eps' > > <file://///localhost:/opt/lampp/htdocs/PHP-Reference-Gateway/experimentData/spiros340e527dece195a74ac7455fbcc6f6fa/spiros_c.eps'>" > > Then it picks up the string. > > My question is: how do I declare in the script that I want an actual file, > not a string? > I’ve tried: > > output_file='file://localhost:///opt/lampp/htdocs/PHP-Reference-Gateway/experimentData/spiros340e527dece195a74ac7455fbcc6f6fa/spiros_c.eps' > > <file://///localhost:/opt/lampp/htdocs/PHP-Reference-Gateway/experimentData/spiros340e527dece195a74ac7455fbcc6f6fa/spiros_c.eps'> > > output_file=”file://localhost:///opt/lampp/htdocs/PHP-Reference-Gateway/experimentData/spiros340e527dece195a74ac7455fbcc6f6fa/spiros_c.eps > > <file://///localhost/opt/lampp/htdocs/PHP-Reference-Gateway/experimentData/spiros340e527dece195a74ac7455fbcc6f6fa/spiros_c.eps>” > > and with the keywords “set”, “declare”, and “export” in front of > “output_file” but have had no success. > > I think I’m missing something in the whole concept of output files, but as a > first step to better understand output files within Airavata, I would like to > know how to hardcode sth. like that in the script and see it appear as a… URI > type? For example, as a string it shows up like this: > > array(1) { [0]=> > object(Airavata\Model\Workspace\Experiment\DataObjectType)#15 (4) { ["key"]=> > string(11) "output_file" ["value"]=> string(127) > "'file://localhost:///opt/lampp/htdocs/PHP-Reference-Gateway/experimentData/spiros340e527dece195a74ac7455fbcc6f6fa/spiros_c.eps' > > <file://///localhost:/opt/lampp/htdocs/PHP-Reference-Gateway/experimentData/spiros340e527dece195a74ac7455fbcc6f6fa/spiros_c.eps'>" > ["type"]=> int(0) ["metaData"]=> NULL } } > > But the array is empty when I try one of the above lines in the script > (output_file= …). > > Thanks in advance, > Spiros
