Hi Daz,
Please turn on the logging in log file:
conf/log4perl.conf
by setting:
log4perl.logger = DEBUG,Screen
Please check if the SQL compilation is as per your expectation. That
will give us more pointers as in how to debug it further.
Best,
Syed
On 31/01/2011 11:19, Darren Oakley wrote:
Hi All,
Hope you can help me with this one...
I have a filter on one of our marts
(www.knockoutmouse.org<http://www.knockoutmouse.org/>, idcc_targ_rep dataset)
configured as a multi-select like so:
---
<FilterCollection displayName="Pipeline" internalName="pipeline">
<FilterDescription displayName="Pipeline" displayType="list" field="pipeline" internalName="pipeline" key="id_1022_key"
legal_qualifiers="=" multipleValues="1" qualifier="=" style="menu" tableConstraint="main" type="list">
<Option displayName="KOMP-CSD" internalName="KOMP-CSD" isSelectable="true"
value="KOMP-CSD"/>
<Option displayName="KOMP-Regeneron" internalName="KOMP-Regeneron"
isSelectable="true" value="KOMP-Regeneron"/>
<Option displayName="EUCOMM" internalName="EUCOMM" isSelectable="true"
value="EUCOMM"/>
<Option displayName="NorCOMM" internalName="NorCOMM" isSelectable="true"
value="NorCOMM"/>
<Option displayName="mirKO" internalName="mirKO" isSelectable="true"
value="mirKO"/>
</FilterDescription>
</FilterCollection>
---
But, it's producing unexpected results when you query for either of the
pipelines separately, or together...
i.e. the following xml:
---
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE Query>
<Query virtualSchemaName = "default" formatter = "CSV" header = "0" uniqueRows = "1" count =
"" datasetConfigVersion = "0.6">
<Dataset name = "idcc_targ_rep" interface = "default">
<Filter name = "pipeline" value = "KOMP-CSD,EUCOMM"/>
<Attribute name = "escell_clone" />
</Dataset>
</Query>
---
retrieves 129816 rows of data, but when you do the different pipelines
separately, they do not add up to this number...
KOMP-CSD on its own is 59440
EUCOMM on its own is 76076
So, combined they give 135516 rows of results - 5700 more than the first query!
The attribute i'm selecting ('escell_clone') is unique for every row in the
database, so it's not that i'm getting duplicates for the separate queries.
Any ideas as to why i'm getting this shortfall in the first query? Is there
something wrong with the way I set up the filter?
Any help is much appreciated. :)
Thanks,
Daz
_______________________________________________
Users mailing list
[email protected]
https://lists.biomart.org/mailman/listinfo/users
