Gulhan, I have tried various queries - and yes, while I get no results from 500,000-1,000,000bp, if I set the filters to for ex. 10,000,000-60,000,000 I get 27 miRNA back. Which means that this is most likely related to the data and not the filters. In this case, I would recommend contacting Ensembl help desk, they are very good at helping with these kinds of questions.
Good luck, Elena On 11-03-25 5:06 AM, "Gulhan Saracaydin" <[email protected]> wrote: > > >Hello BioMart developers, > >I have tried to generate a list of all Danio Rerio miRNA-coding genes that >are located on chromosome 3, between base-pairs 500,000-1,000,000. >However, I think there is a problem in Zebrafish database since I got the >miRNA-coding genes without any selection but when I select the region, I >got nothing. Also, I used miRBase to confirm that there are miRNAs in >Danio Rerio in selected region. > >I wonder whether there is a problem with Zebrafish Gene Database in >Ensembl and BioMart. If you give me an answer about this question, I would >be glad. > >Hoping to hear from you, > >Kind regards, > >Gulhan Saracaydin > > >_______________________________________________ >Users mailing list >[email protected] >https://lists.biomart.org/mailman/listinfo/users _______________________________________________ Users mailing list [email protected] https://lists.biomart.org/mailman/listinfo/users
