Dear Jonathan, Thanks for a very quick response. Indexing of the search attribute seems to be the problem in our case.
Thanks and regards, Parul Kudtarkar > The MartSearch GUI type is currently not recommended for production use. > If you'd like to try experimenting with it, you can look at the example in > the icgc6.xml registry included in RC6. Also, be sure that the > attribute(s) you're searching against are indexed in your database, > otherwise results will be prohibitively slow. > > Jonathan Guberman, PhD > Application Programmer > > Ontario Institute for Cancer Research > MaRS Centre, South Tower > 101 College Street, Suite 800 > Toronto, Ontario, Canada M5G 0A3 > > Tel: 647-260-7818 > Toll-free: 1-866-678-6427 > www.oicr.on.ca<http://www.oicr.on.ca> > > On 2011-08-29, at 3:14 PM, Parul Kudtarkar wrote: > > Dear Biomart community, > > When I set my GUI type to martsearch I get time out error. I understand > that mart search is currently under development. However I see icgc have > sucessfully implemented martsearch. Any tips on this matter would be > useful. > > http://dcc.icgc.org/martsearch/#!/?q=TP53 > > Thanks and regards, > Parul Kudtarkar > > -- > Parul Kudtarkar > Scientific Programmer > Center for Computational Regulatory Genomics > Beckman Institute, > California Institute of Technology > http://www.spbase.org > > _______________________________________________ > Users mailing list > [email protected] > https://lists.biomart.org/mailman/listinfo/users > > -- Parul Kudtarkar Scientific Programmer Center for Computational Regulatory Genomics Beckman Institute, California Institute of Technology http://www.spbase.org _______________________________________________ Users mailing list [email protected] https://lists.biomart.org/mailman/listinfo/users
