Hi Juan, could you elaborate more on BioMart 'translating genomic positions' of genes from zv8 to zv9? I am unclear what you mean by that
cheers, a On Fri, Sep 16, 2011 at 6:53 AM, Juan Martinez <[email protected]> wrote: > > Dear Arek, > > First we would like to thank you for Biomart, is a fantastic tool > for non-experts. > We have a huge dataset (Chipseq data) mapped on an older version of the > zebrafish genome (zv8) and we would like to link it to some BIomart data, > which works only with zv9. Currently Biomart can transform the GENOMIC > POSITIONS of genes annotated in zv8 to zv9, but NOT conversely. > > We would appreciate any suggestions to go around this problem > without loosing too many data. > > Thanks a lot in advance for your help, > > Juan > > > Juan Ramón Martínez Morales > Centro Andaluz de Biología del Desarrollo (CABD) > (Andalusian Centre for Developmental Biology) > CSIC-Universidad Pablo de Olavide > Carretera de Utrera, Km1 > 41013 Sevilla, Spain > +34954977827 > [email protected] > > > > > > >
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