Hi Ronald, A few questions to help me with a 'diagnosis' of the problem: Are you creating your mart from scratch or are you extending the existing pride mart? Do you use double underscores for table names and single underscores for 'key' names? Did your attributes show up in the naive configuration or did you add them manually later?
a On Tue, Dec 20, 2011 at 9:24 AM, Greenman, Ronald (NIH/CIT) [C] < [email protected]> wrote: > I'm running a mart (based on the one used by PRIDE), but I need to add a > new table to it. I'm currently calling it pride__spectrum__main, and I > don't think I need to add any dimension tables for now. I'm having some > trouble getting the API to recognize it, though. Although the filters and > attributes I created show up in martview, attempting to use them results in > a critical error: it says that it can't find the table 'main', which > doesn't sound like it falls into the BioMart naming scheme. > > I made a pride__spectrum__main table, with a primary key as the column > 'spectrum__id__key', and added spectrum_id_ref columns in other tables as > needed. I used marteditor to create an attribute set keyed to that table as > well as a set of filters for it. Is there something else I need to do to > make this work? > _______________________________________________ > Users mailing list > [email protected] > https://lists.biomart.org/mailman/listinfo/users >
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