Hi Joan, first of all you need to be aware that rc7 has not been officially released. I am not sure how much testing gone into that. The last official release is rc6. InnoDB should definitely work and behave just like oracle or postgres. Are you choosing the right DB platform option ei NOT MySQL MyISM?
a On Mon, Jan 23, 2012 at 7:35 AM, <[email protected]> wrote: > Hi all,**** > > ** ** > > I have problems adding new source from a local database. I am working with > the new Biomart version r7 and the local database works with constraints in > InnoDB format. If I try to add the source using the MartConfigurator and > click into the Schema Editor I don’t see the relations like the mysql > constraints. I have read the paper “Biomart: a data federation framework…” > and if I understand it well it says the source must be a relational db as > we have but I am not sure if the InnoDB format is good for Biomart. Could > you help me?**** > > ** ** > > Thanks a lot,**** > > ** ** > > Salutacions, **** > > Joan **** > > **** > > > ------------------------------------------------------------------------------ > **** > > **** > > Joan Protasio**** > > *Bioinformatics Unit: *http://bioinformatics.fcrb.es/bioinformatics/**** > > August Pi i Sunyer Biomedical Research Institute (IDIBAPS)**** > > Phone: 93.227.54.00 (Ext. 4522)**** > > C/ Rosselló 153**** > > 08036 Barcelona**** > > _______________________________________________ > Users mailing list > [email protected] > https://lists.biomart.org/mailman/listinfo/users > > -- Arek Kasprzyk, MD, MSc, PhD BioMart Project Lead
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