Syed,
Can you please provide me the EnsembleMartDB configuration xml?
I tried following 2 martURLlocations
<MartURLLocation
name = "msd"
displayName = "My BioMart Database"
host = "www.biomart.org"
port = "80"
visible = "1"
default = ""
includeDatasets = "msd"
martUser = ""
/>
<MartURLLocation
database="unimart"
default=""
displayName="UNIPROT (EBI UK)"
host="www.ebi.ac.uk"
includeDatasets=""
martUser=""
name="unimart"
path="/uniprot/biomart/martservice"
port="80"
redirect="1"
serverVirtualSchema="default"
visible="1"
/>
I am able to query MSD mart but not able to query UNIPROT. I get same
error ERROR: requested template missing
Thanks,
Anu
On Thu, Jul 5, 2012 at 2:10 PM, Syed Haider <sa...@cam.ac.uk> wrote:
> Hi Anu,
>
> i wonder if you have tried using the ensembl martdb params to see if that
> works for you ?
>
> some pointers are available in this thread too:
>
> http://comments.gmane.org/**gmane.science.biology.biomart.**general/1136<http://comments.gmane.org/gmane.science.biology.biomart.general/1136>
>
> Best,
> Syed
>
>
> On 04/07/2012 19:14, anu jagtap wrote:
>
>>
>> Hi,
>>
>>
>> I have created a mart using marbuilder and marteditor. Mart is in MySQL
>> database and I have provided the registry details using martDBlocation.
>> I am able to see the mart in drop down list in Martview But when I try
>> to query the mart using Martview, it errors out with below message
>>
>>
>> ERROR: requested template missing
>>
>>
>> Can you please help me resolve this error.
>>
>> Thanks,
>> Anu
>>
>>
>>
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>>
>>
>
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