Dear Arek,
Thank you for forwarding my e-mail to the proper team. I have also
noticed that accessing Reactome from EBI Biomart does not work while
accessing Reactome from Ensembl Biomart is just fine.
Regards
Leon-Charles
Dear Leon-Charles,
This looks to me like an error on the Reactome side or the problem
with synching. I am forwarding your email to the Reactome developers.
I hope they will be able to comment
a
On Fri, Aug 3, 2012 at 2:54 PM, Leon-Charles Tranchevent
<[email protected]
<mailto:[email protected]>> wrote:
Dear,
I wanted to access the Reactome data through Biomart but there
seems to be a problem. The error message is "Query ERROR: caught
BioMart::Exception::Database: Error during query execution:
Incorrect key file for table 'main'; try to repair it". This error
seems to happen for any Reactome query (in particular it happens
for the queries built by default).
Regards
Leon-Charles Tranchevent
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Arek Kasprzyk, MD, MSc, PhD
BioMart Project Lead
www.biomart.org <http://www.biomart.org>
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