Hi Arek, Looks like it is resolved.
Thanks for checking, Steffen On Fri, Oct 5, 2012 at 5:48 AM, Arek Kasprzyk <[email protected]>wrote: > Hi Steffen, > is this still a problem? I just tried to reproduce it but the query seemed > to worked fine producing the following result: > > HGNC symbol Ensembl Gene ID > TP53 ENSG00000141510 > > > > a > > > > > > > > On Thu, Oct 4, 2012 at 10:33 PM, Steffen Durinck <[email protected]>wrote: > >> Hi Arek, >> >> biomaRt users are reporting the following error today. Any query to the >> central BioMart server doesn't work. >> An example: >> >> <?xml version='1.0' encoding='UTF-8'?><!DOCTYPE Query><Query >> virtualSchemaName = 'default' uniqueRows = '1' count = '0' >> datasetConfigVersion = '0.6' header='1' requestid= "biomaRt"> <Dataset name >> = 'hsapiens_gene_ensembl'><Attribute name = 'hgnc_symbol'/><Attribute name >> = 'ensembl_gene_id'/><Filter name = 'hgnc_symbol' value = 'TP53' >> /></Dataset></Query> >> >> gives: >> >> Query ERROR: caught BioMart::Exception::Database: Could not connect to >> mysql database ensembl_mart_68: DBI connect('database=ensembl_mart_68;host= >> bmdccdb.oicr.on.ca;port=3306','bm_web',...) failed: Host ' >> bmdcc1.oicr.on.ca' is blocked because of many connection errors; unblock >> with 'mysqladmin flush-hosts' at /srv/biomart_server/ >> biomart.org/biomart-perl/lib/BioMart/Configuration/DBLocation.pm line 98 >> >> Any idea what is causing this? >> >> Cheers, >> Steffen >> >> _______________________________________________ >> Users mailing list >> [email protected] >> https://lists.biomart.org/mailman/listinfo/users >> >> >
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