Dear all,
there seems to be an error in the biomart connection. Can anyone look into
this please?
Error:
Error in getBM(c("ensembl_gene_id", "ensembl_transcript_id", "ensembl_exon :
Query ERROR: caught BioMart::Exception::Database: Could not connect to
matabase ensembl_mart_69: DBI
connect('database=ensembl_mart_69;host=bm_myst=3306','bmweb',...) failed:
Host '54.225.80.241' is blocked because of manection errors; unblock with
'mysqladmin flush-hosts' at /srv/
biomart_servmart.org/biomart-perl/lib/BioMart/Configuration/DBLocation.pm line
98
Code example:
#load Bioconductor
source("http://bioconductor.org/biocLite.R";)
#load package GenomeGraphs
library(GenomeGraphs)
mart <- useMart(biomart = "ensembl", dataset = "hsapiens_gene_ensembl")
makeGeneRegion(start=105800000, end=107800000, strand="+", chromosome="7",
biomart=mart)
Thanks
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