I get the impression that my attachments may not have been attached. Here they
appear as inline text, which hopefully will be readable, hoping to get an
understanding of why I can't run the Simplified Tutorial with more than one
thread.
static_tov/SIMFACTORY/run/RunScript#! /bin/bash
echo "Preparing:"set -x # Output commandsset -e
# Abort on errors
cd @RUNDIR@-active
echo "Checking:"pwdhostnamedate
echo "Environment:"export CACTUS_NUM_PROCS=@NUM_PROCS@export
CACTUS_NUM_THREADS=@NUM_THREADS@export GMON_OUT_PREFIX=gmon.outexport
OMP_NUM_THREADS=@NUM_THREADS@env > SIMFACTORY/ENVIRONMENT
echo "Starting:"export CACTUS_STARTTIME=$(date +%s)#mpd --daemonmpirun -np
@NUM_PROCS@ @EXECUTABLE@ -L 3 @PARFILE@
echo "Stopping:"date
echo "Done."
static_tov/output-0002/SIMFACTORY/RunScript#! /bin/bash
echo "Preparing:"set -x # Output commandsset -e
# Abort on errors
cd /home/robert/simulations/static_tov/output-0002-active(Exports the wrong
stuff. Changes to machine file had already been made.)
echo "Checking:"pwdhostnamedate
echo "Environment:"export CACTUS_NUM_PROCS=1export CACTUS_NUM_THREADS=1export
GMON_OUT_PREFIX=gmon.outexport OMP_NUM_THREADS=1env > SIMFACTORY/ENVIRONMENT
echo "Starting:"export CACTUS_STARTTIME=$(date +%s)#mpd --daemonmpirun -np 1
/home/robert/simulations/static_tov/SIMFACTORY/exe/cactus_sim -L 3
/home/robert/simulations/static_tov/output-0002/static_tov_small.par
echo "Stopping:"date
echo "Done."
static_tov/SIMFACTORY/properties.ini[properties]machine =
robert-desktopsimulationid =
simulation-static_tov-robert-desktop-robert-desktop-robert-2017.05.01-22.30.19-17921sourcedir
= /home/robert/Cactusconfiguration = simconfigid =
config-sim-robert-desktop-home-robert-Cactusbuildid =
build-sim-robert-desktop-robert-2017.05.02-05.04.57-3349testsuite =
Falseexecutable =
/home/robert/simulations/static_tov/SIMFACTORY/exe/cactus_simoptionlist =
/home/robert/simulations/static_tov/SIMFACTORY/cfg/OptionListsubmitscript =
/home/robert/simulations/static_tov/SIMFACTORY/run/SubmitScriptrunscript
= /home/robert/simulations/static_tov/SIMFACTORY/run/RunScriptparfile =
/home/robert/simulations/static_tov/SIMFACTORY/par/static_tov_small.par
machine.ini# Machine description (Changes made)nickname =
robert-desktopname = robert-desktoplocation =
somewheredescription = Whateverstatus = personal
# Access to this machinehostname = robert-desktopaliaspattern =
^generic\.some\.where$
# Source tree managementsourcebasedir = /home/robertoptionlist =
/home/robert/Cactus/repos/simfactory2/mdb/optionlists/ubuntu.cfgsubmitscript
= generic.subrunscript =
/home/robert/Cactus/repos/simfactory2/mdb/runscripts/debian.shmake =
makebasedir = /home/robert/simulationsppn =
4max-num-threads = 4num-threads = 4nodes = 1submit =
exec @SCRIPTFILE@ < /dev/null > /dev/null 2> /dev/null & echo $!getstatus
= ps @JOB_ID@stop = kill @JOB_ID@submitpattern = (.*)statuspattern
= "^ *@JOB_ID@ "queuedpattern = $^runningpattern = ^holdingpattern =
$^exechost = echo localhostexechostpattern = (.*)stdout = cat
@[email protected] = cat @[email protected]
= tail -n 100 -f @[email protected] @[email protected]
# modify parameter file for smaller memory footprint using sed sed
'/CoordBase::d[xyz]/s/8/12/' <par/static_tov.par >par/static_tov_small.par #
start simulation, watch log output ./simfactory/bin/sim submit static_tov
--parfile=par/static_tov_small.par --procs=4 --walltime=8:0:0
./simfactory/bin/sim show-output --follow static_tov
Here procs changed from 1 to 4, gives error message.
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