Thanks Ian,

I did a sim purge static_tov and tried rebuilding with ./simfactory/bin/sim 
build --mdbkey make 'make -j2' --thornlist=kranc.th <http://kranc.th/> (I 
needed to add a couple more thorns into kranc.th after submitting and getting 
error messages) but now I get an error

Formaline: Pushing to master git repository...
Formaline: ERROR during: Pushing to master git repository
Pushing to /Users/Guy/Documents/EinsteinToolkit/Cactus/cactusjar.git
Total 0 (delta 0), reused 0 (delta 0)
remote: error: cannot lock ref 
'refs/heads/config-sim-Guy-Pitman.local-Users-Guy-Documents-EinsteinToolkit-Cactus':
 is at ca3fd643c45d8b1a29e9cbace4d149036b6534a3 but expected 
883ab226b3bd16363cdf557c0752a9d97ccfb396
To /Users/Guy/Documents/EinsteinToolkit/Cactus/cactusjar.git
 = [up to date]      master -> master
 ! [remote rejected] 
config-sim-Guy-Pitman.local-Users-Guy-Documents-EinsteinToolkit-Cactus -> 
config-sim-Guy-Pitman.local-Users-Guy-Documents-EinsteinToolkit-Cactus (failed 
to update ref)
error: failed to push some refs to 
'/Users/Guy/Documents/EinsteinToolkit/Cactus/cactusjar.git'


I have googled the git errors, but nothing seems to help- can I reinitialise 
the repositories some how to get over this error?

Thanks and regards

Guy



> On 6 Feb 2017, at 7:12 pm, Ian Hinder <[email protected]> wrote:
> 
> 
> On 6 Feb 2017, at 02:08, Guy Pitman <[email protected] 
> <mailto:[email protected]>> wrote:
> 
>> Hi Ian,
>> 
>> I ran the following command ./simfactory/bin/sim build --mdbkey make 'make 
>> -j2' --thornlist=kranc.th <http://kranc.th/>  with the attached Thornlist, 
>> which included the CT_Dust Kranc thorn, and then ran 
>> ./simfactory/bin/sim submit static_tov --parfile=par/static_tov_small.par 
>> --procs=1 --walltime=8:0:0  with the attached parameter file, which also 
>> includes CT_Dust , but when I look at the output in 
>> ~/simulations/static_tov/output-0003, the  static_tov_small.par which I 
>> assume has been copied from the par directory has CT_Dust removed?  The 
>> static_tov.out file also has no reference to CT_Dust.  Can you see what I am 
>> doing wrong?
>> 
> 
> Hi,
> 
> sim submit not only creates a new simulation, but also continues existing 
> simulations.  The fact that you have an output-0003 means this is the 4th 
> time you have submitted the same simulation.  In that case, I don't know 
> whether simfactory tries to update the parameter file.  It really shouldn't 
> accept the option without an error if it's just going to ignore it, but I 
> wouldn't be surprised if it did.  I suggest to delete the whole simulation 
> and try again.  You can also use
> 
>       sim purge static_tov
> 
> which will do the deletion.
> 
> -- 
> Ian Hinder
> http://members.aei.mpg.de/ianhin <http://members.aei.mpg.de/ianhin>

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