I'm trying to build SGE from source on a RHEL5.5 system. I'm using the gcc
4.1.2 compiler
I obtained the tarball SGE6.2u5p1.tar.gz from sourceforge, and am following the
instructions in README.BUILD.
I make it to step 6, run aimk, and eventually get many variants of the
following error:
_________C_O_R_E__S_Y_S_T_E_M_____________
gcc -DSGE_ARCH_STRING=\"lx26-amd64\" -O3 -Wall -Werror -Wstrict-prototypes
-DUSE_POLL -DLINUX -DLINUXAMD64 -DLINUXAMD64_26 -D_GNU_SOURCE
-DGETHOSTBYNAME_R6 -DGETHOSTBYADDR_R8 -DLOAD_OPENSSL
-I/opt/berkdb-5.1.25/include//opt/berkdb-5.1.25/include -DTARGET_64BIT
-DSPOOLING_berkeleydb -DSECURE
-I/off_home/gridengine/openssl-0.9.8h-origin/lx26-amd64/include
-Wno-strict-aliasing -DPLPA -DCOMPILE_DC -D__SGE_COMPILE_WITH_GETTEXT__
-D__SGE_NO_USERMAPPING__ -I../common -I../libs -I../libs/uti -I../libs/juti
-I../libs/gdi -I../libs/japi -I../libs/sgeobj -I../libs/cull -I../libs/rmon
-I../libs/comm -I../libs/comm/lists -I../libs/sched -I../libs/evc -I../libs/evm
-I../libs/mir -I../libs/lck -I../daemons/common -I../daemons/qmaster
-I../daemons/execd -I../daemons/schedd -I../clients/common -I.
-I/opt/SGE6.2u5p1/source/3rdparty/plpa/plpa-1.3.1/src/libplpa -I/usr/include
-I/usr/include/linux -fPIC -c ../libs/sgeobj/config.c
In file included from /usr/include/_G_config.h:44,
from /usr/include/libio.h:32,
from /usr/include/stdio.h:72,
from ../libs/sgeobj/config.c:33:
/usr/include/gconv.h:72: error: expected declaration specifiers or ‘...’ before
‘size_t’
/usr/include/gconv.h:88: error: expected declaration specifiers or ‘...’ before
‘size_t’
/usr/include/gconv.h:97: error: expected declaration specifiers or ‘...’ before
‘size_t’
/usr/include/gconv.h:174: error: expected specifier-qualifier-list before
‘size_t’
Looking at these, it looks like the stddef.h being picked up is not what's
expected (that's where size_t is defined).
Optionally, I could try building against gcc 4.4.4, which is also available on
our systems, but first I figured I'd ask
here to see if anyone else has built SGE with gcc 4.1 on RHEL5, and if so did
they encounter this problem.
Thanks for any advice,
Mark
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