2 obvious problems
(1) Your queue instances are in error state E which means no jobs will
run ever. State E is a peristent error that must be manually cleared by
an SGE admin
(2) You have 0 set in the "slots" value for your mat-lab queue. This
means that unless slots are inherited by the exec hosts itself your
queue is going to apply a value of 0 slots
So quick advice ..
- Clear the error states from the matlab queue instances
- Set some manual # of slots in your matlab queue just to see if it
makes a difference
-Chris
Eric Kaufmann wrote:
Here is some of the requested information.
qstat -f -q matlab
queuename qtype resv/used/tot. load_avg arch
states
---------------------------------------------------------------------------------
[email protected] BIP 0/0/0 0.00 lx26-amd64 E
---------------------------------------------------------------------------------
[email protected] BIP 0/0/0 0.00 lx26-amd64 E
---------------------------------------------------------------------------------
[email protected] BIP 0/0/0 0.00 lx26-amd64 E
qconf -sql
Dcradle
all.q
cdt
check
clong
goodson
linda
long
matlab
sapt
schrod
std
qconf -sq matlab
qname matlab
hostlist @matlab
seq_no 0
load_thresholds NONE
suspend_thresholds NONE
nsuspend 1
suspend_interval 00:05:00
priority 0
min_cpu_interval 00:05:00
processors UNDEFINED
qtype BATCH INTERACTIVE
ckpt_list NONE
pe_list matlabPE
rerun FALSE
slots 0
tmpdir /tmp
shell /bin/bash
prolog NONE
epilog NONE
shell_start_mode posix_compliant
starter_method NONE
suspend_method NONE
resume_method NONE
terminate_method NONE
notify 00:00:60
owner_list NONE
user_lists NONE
xuser_lists NONE
subordinate_list NONE
complex_values NONE
projects NONE
xprojects NONE
calendar NONE
initial_state default
s_rt INFINITY
h_rt INFINITY
s_cpu INFINITY
h_cpu INFINITY
s_fsize INFINITY
h_fsize INFINITY
s_data INFINITY
h_data INFINITY
s_stack INFINITY
h_stack INFINITY
s_core INFINITY
h_core INFINITY
s_rss INFINITY
h_rss INFINITY
s_vmem INFINITY
h_vmem INFINITY
Here is the output of
On Mon, Aug 8, 2011 at 4:05 PM, Chris Dagdigian <[email protected]
<mailto:[email protected]>> wrote:
If you post the output of 'qconf -sq <matlab queue name>' we can
provide more targeted advice.
qstat -f -q <queuename> output might be useful as well just so we
can be sure your nodes are actually up and not in error state
It sounds as though you have a cluster queue set up without any
available hosts configured within it? Your hosts entry for the queue
should say "@allhosts" or "@matlabhosts" however you set it up. It
should not be "@/" - it has to name or reference an existing and
real SGE hostgroup. It may be possible you have a hostgroup created
without any actual hosts defined within it.
Showing the 'qconf -s ...' output for the PE, queue and hostgroups
would help
-Chris
Eric Kaufmann wrote:
I am running SGE 6.2 on a Rocks 5.2 cluster. I am trying to add
a new
parallel environment and queue for Matlab. I was able to add
both. The
queue for Matlab shows zero slots available. I did create a
matlab host
group. This shows up in the Hostgroup list. In the Attributes for
Host/Host Group @/ is listed but that is all.
I have other queues where machines are also listed in the
Attributes for
Host/Host Group.
What am I missing here? Is there also a way to set up a parallel
environment so only one que can use it?
Thanks,
Eric
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