Thank you very much Mr. Reuti. I can run mpi jobs with new open mpi compiled with option --with-sge. some questions: 1) job finished and output file was created , but job's state remain running for a little time. why?
2) for request many slots(e.g. 800 or upper slots), job ran completely and at the end output file I got the error: mpi-integ-sge-intel.comp:9728 terminated with signal 11 at PC=2b42bb65b60e SP=7fffd361dcd0. Backtrace: mpi-integ-sge-intel.comp:9729 terminated with signal 11 at PC=2afc5c30c60e SP=7fff87c03e50. Backtrace: /usr/lib64/libpsm_infinipath.so.1[0x2b42bb65b60e] /usr/lib64/libpsm_infinipath.so.1[0x2b42bb66c4de] /usr/lib64/libpsm_infinipath.so.1(ips_ptl_shared_poll+0x230)[0x2b42bb66b4d0] /usr/lib64/libpsm_infinipath.so.1(psmi_poll_internal+0x50)[0x2b42bb66b080] /usr/lib64/libpsm_infinipath.so.1(ips_proto_fini+0x1c0)[0x2b42bb65f190] /usr/lib64/libpsm_infinipath.so.1[0x2afc5c30c60e] /usr/lib64/libpsm_infinipath.so.1[0x2afc5c31d4de] /usr/lib64/libpsm_infinipath.so.1(ips_ptl_shared_poll+0x230)[0x2afc5c31c4d0] /usr/lib64/libpsm_infinipath.so.1(psmi_poll_internal+0x50)[0x2afc5c31c080] /usr/lib64/libpsm_infinipath.so.1(ips_proto_fini+0x1c0)[0x2afc5c310190] /usr/lib64/libpsm_infinipath.so.1[0x2b42bb65b480] /usr/lib64/libpsm_infinipath.so.1(psm_ep_close+0x1a9)[0x2b42bb651de9] /home/mrustaee/PF/openmpi-1.4.2/intel/lib/openmpi/mca_mtl_psm.so[0x2b42bb42d734] 3) I defined a PE with old open mpi (without integration of sge):pe_name mpifillamd slots 9999 user_lists NONE xuser_lists NONE start_proc_args /opt/gridengine/mpi/startmpi.sh $pe_hostfile stop_proc_args /opt/gridengine/mpi/stopmpi.sh allocation_rule $fill_up control_slaves FALSE job_is_first_task FALSE urgency_slots min accounting_summary FALSE In this case, submited jobs could not run with high request slots. Is that mean "users can not run job with high request slots on loosly integration open mpi " ? Thx
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