Hi, Am 06.12.2011 um 10:14 schrieb Hongsheng Zhao:
> I run the dmol3 of MaterialsStudio55 standalonely by using pbs queueing > system. > > In the pbs script for my job, I use the following lines: > > ------- > # Set filenames for PBS to log standard error and standard output. > #PBS -o stdout > #PBS -e stderr > --------- this mailing list is for GridEngine. As you use PBS or Torque, I suggest to turn to their mailing lists: http://www.adaptivecomputing.com/resources/mailing-lists.php -- Reuti > After the job has been finished, I find the following information in the > stderr file in the current directory: > > ------------- > zhaohongsheng@node32:~/work/Dr.Zhao/dmol3_test> cat stderr > cp: cannot stat > `/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d77489120701/Ge.tpdensk'cp: > cannot stat > `/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d283602120619/Ge.tpdensk': > No such file or directory > cp: cannot stat > `/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d283591120619/Ge.tpdensk': > No such file or directory > : No such file or directory > cp: cannot stat > `/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d77423120701/Ge.tpdensk': > No such file or directory > cp: cannot stat > `/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d77456120701/Ge.tpdensk': > No such file or directory > cp: cannot stat > `/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d77478120701/Ge.tpdensk': > No such file or directory > cp: cannot stat > `/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d774910120701/Ge.tpdensk': > No such file or directory > cp: cannot stat > `/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d77434120701/Ge.tpdensk': > No such file or directory > cp: cannot stat > `/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d77445120701/Ge.tpdensk': > No such file or directory > cp: cannot stat > `/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d283602120619/Ge.tpdensk_': > No such file or directory > cp: cannot stat > `/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d283591120619/Ge.tpdensk_': > No such file or directory > cp: cannot stat > `/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d77467120701/Ge.tpdensk': > No such file or directory > cp: cannot stat > `/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d77423120701/Ge.tpdensk_': > No such file or directory > cp: cannot stat > `/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d77456120701/Ge.tpdensk_': > No such file or directory > cp: cannot stat > `/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d77489120701/Ge.tpdensk_': > No such file or directory > cp: cannot stat > `/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d774910120701/Ge.tpdensk_': > No such file or directory > cp: cannot stat > `/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d77478120701/Ge.tpdensk_': > No such file or directory > cp: cannot stat > `/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d77445120701/Ge.tpdensk_': > No such file or directory > cp: cannot stat > `/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d283602120619/Ge.tpdensk_': > No such file or directory > cp: cannot stat > `/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d283591120619/Ge.tpdensk_': > No such file or directory > cp: cannot stat > `/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d77423120701/Ge.tpdensk_': > No such file or directory > cp: cannot stat > `/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d77434120701/Ge.tpdensk_': > No such file or directory > cp: cannot stat > `/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d77467120701/Ge.tpdensk_': > No such file or directory > cp: cannot stat > `/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d77456120701/Ge.tpdensk_': > No such file or directory > cp: cannot stat > `/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d774910120701/Ge.tpdensk_': > No such file or directory > cp: cannot stat > `/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d77489120701/Ge.tpdensk_': > No such file or directory > cp: cannot stat > `/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d77478120701/Ge.tpdensk_': > No such file or directory > cp: cannot stat > `/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d77445120701/Ge.tpdensk_': > No such file or directory > cp: cannot stat > `/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d77467120701/Ge.tpdensk_': > No such file or directory > cp: cannot stat > `/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d77434120701/Ge.tpdensk_': > No such file or directory > cp: cannot stat > `/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d77445120701/Ge.tpdensk_': > No such file or directory > cp: cannot stat > `/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d77478120701/Ge.tpdensk_': > No such file or directory > cp: cannot stat > `/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d283602120619/Ge.tpdensk_': > No such file or directory > cp: cannot stat > `/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d77434120701/Ge.tpdensk_': > No such file or directory > cp: cannot stat > `/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d283591120619/Ge.tpdensk_': > No such file or directory > cp: cannot stat > `/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d77456120701/Ge.tpdensk_': > No such file or directory > cp: cannot stat > `/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d77423120701/Ge.tpdensk_'cp: > cannot stat > `/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d774910120701/Ge.tpdensk_': > No such file or directory > : No such file or directory > cp: cannot stat > `/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d77489120701/Ge.tpdensk_': > No such file or directory > cp: cannot stat > `/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d77467120701/Ge.tpdensk_': > No such file or directory > cp: cannot stat > `/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d77478120701/Ge.tpdensk_': > No such file or directory > cp: cannot stat > `/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d283602120619/Ge.tpdensk_': > No such file or directory > cp: cannot stat > `/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d77445120701/Ge.tpdensk_': > No such file or directory > cp: cannot stat > `/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d283591120619/Ge.tpdensk_': > No such file or directory > cp: cannot stat > `/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d77456120701/Ge.tpdensk_': > No such file or directory > cp: cannot stat > `/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d77434120701/Ge.tpdensk_': > No such file or directory > cp: cannot stat > `/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d77489120701/Ge.tpdensk_': > No such file or directory > cp: cannot stat > `/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d77423120701/Ge.tpdensk_': > No such file or directory > cp: cannot stat > `/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d774910120701/Ge.tpdensk_': > No such file or directory > cp: cannot stat > `/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d77467120701/Ge.tpdensk_': > No such file or directory > cp: cannot stat > `/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d283591120619/Ge.tpdensk_': > No such file or directory > cp: cannot stat > `/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d283602120619/Ge.tpdensk_': > No such file or directory > cp: cp: cannot stat > `/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d77467120701/Ge.tpdensk_'cannot > stat > `/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d77478120701/Ge.tpdensk_': > No such file or directory: No such file or directory > > cp: cannot stat > `/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d77423120701/Ge.tpdensk_': > No such file or directory > cp: cannot stat > `/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d77489120701/Ge.tpdensk_'cp: > cannot stat > `/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d77456120701/Ge.tpdensk_'cp: > cannot stat > `/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d77445120701/Ge.tpdensk_': > No such file or directory > cp: cannot stat > `/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d77434120701/Ge.tpdensk_': > No such file or directory > : No such file or directory > : No such file or directory > cp: cannot stat > `/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d774910120701/Ge.tpdensk_': > No such file or directory > cp: cannot stat > `/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d283591120619/Ge.tpdensk_': > No such file or directory > cp: cannot stat > `/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d283602120619/Ge.tpdensk_': > No such file or directory > cp: cannot stat > `/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d77467120701/Ge.tpdensk_': > No such file or directory > cp: cannot stat > `/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d77478120701/Ge.tpdensk_': > No such file or directory > cp: cannot stat > `/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d77423120701/Ge.tpdensk_': > No such file or directory > cp: cannot stat > `/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d283591120619/Ge.tpdensk_': > No such file or directory > cp: cannot stat > `/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d77445120701/Ge.tpdensk_': > No such file or directory > cp: cannot stat > `/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d774910120701/Ge.tpdensk_': > No such file or directory > cp: cannot stat > `/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d77434120701/Ge.tpdensk_': > No such file or directory > cp: cannot stat > `/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d77489120701/Ge.tpdensk_': > No such file or directory > cp: cannot stat > `/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d77456120701/Ge.tpdensk_': > No such file or directory > cp: cannot stat > `/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d283602120619/Ge.tpdensk_': > No such file or directory > cp: cannot stat > `/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d77467120701/Ge.tpdensk_': > No such file or directory > cp: cannot stat > `/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d77423120701/Ge.tpdensk_': > No such file or directory > cp: cannot stat > `/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d774910120701/Ge.tpdensk_': > No such file or directory > cp: cannot stat > `/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d77478120701/Ge.tpdensk_'cp: > cannot stat > `/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d77445120701/Ge.tpdensk_': > No such file or directory > cp: cannot stat > `/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d77434120701/Ge.tpdensk_': > No such file or directory > : No such file or directory > cp: cannot stat > `/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d77489120701/Ge.tpdensk_': > No such file or directory > cp: cannot stat > `/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d77456120701/Ge.tpdensk_': > No such file or directory > zhaohongsheng@node32:~/work/Dr.Zhao/dmol3_test> > -------------- > > But, it seems that the job has been preformed successfully. I cann't figure > out why does this happen. Any hints will highly appreciated. > > Best regards > -- > Hongsheng Zhao <[email protected]> > School of Physics and Electrical Information Science, > Ningxia University, Yinchuan 750021, China > _______________________________________________ > users mailing list > [email protected] > https://gridengine.org/mailman/listinfo/users _______________________________________________ users mailing list [email protected] https://gridengine.org/mailman/listinfo/users
