On Tue, Jan 31, 2012 at 2:00 PM, Reuti <[email protected]> wrote: > Am 31.01.2012 um 19:51 schrieb Lane Schwartz: > >> On Tue, Jan 31, 2012 at 1:12 PM, Reuti <[email protected]> wrote: >>> Am 31.01.2012 um 18:10 schrieb Lane Schwartz: >>> >>>> On Fri, Jan 27, 2012 at 3:42 PM, Rayson Ho <[email protected]> >>>> wrote: >>>>> On Fri, Jan 27, 2012 at 2:49 PM, Lane Schwartz <[email protected]> wrote: >>>>>> I have encountered a problem where sometimes (but not always) my jobs >>>>>> ignore the -cwd or -wd flags and run in my home directory instead of >>>>>> the specified working directory. I can run the same job multiple times >>>>>> launching from the same directory, and sometimes the job correctly >>>>>> runs from the current directory, and sometimes it runs from my home >>>>>> directory. >>>>> >>>>> I ran over 100 test jobs and all of them ran in directory specified in >>>>> -cwd or -wd. How easy is it to reproduce the issue?? Is the home >>>>> directory on NFS or some kind of network or cluster storage?? >>>> >>>> The home directory is mounted via NFS. The correct directory (where >>>> the jobs are launched from) is also on NFS. >>> >>> Do you use automounter or is it a hard mount? >>> >>> (/scratch4 is mounted on all the exechosts if I get you right) >> >> The /scratch4 directory is hard mounted on all of the hosts. > > Do you have any facility to source .bashrc, as by default it's not used for > submitted jobs (or is it a feature of SoGE?).
I'm not sure what you mean. When I log in to a normal bash shell ~/.bashrc is sourced. When I submit my job I am passing it the -V flag, so everything in my current environment should be passed to the job. What is SoGE? Thanks, Lane _______________________________________________ users mailing list [email protected] https://gridengine.org/mailman/listinfo/users
