Hello,
A number of years ago, our group created a rocks cluster consisting of a
head node, a data node and eight execution nodes. The eight execution nodes
can only be accessed by the head node.
My goal is to add a submit node to the existing cluster. I have downloaded
GE2011.11 and compiled from source without errors. When I try the command:
qsub simple.sh
I get the error:
Unable to run job: warning: root your job is not allowed to run in any
queue
When I look at qstat I get:
job-ID prior name user state submit/start at
queue slots ja-task-ID
-----------------------------------------------------------------------------------------------------------------
1 0.55500 simple.sh root qw 03/27/2012
09:41:11 1
I have added the new submit node to the list of submit nodes on the head
node using the command
qconf -as
When I run qconf -ss on the new submit node I see the head node, the data
node and the new submit node.
When I run qconf -ss on the head node, I see the head node, the data node,
the new submit node and all eight execution nodes.
When I run qhost on the new submit node, I get
HOSTNAME ARCH NCPU LOAD MEMTOT MEMUSE SWAPTO
SWAPUS
-------------------------------------------------------------------------------
global - - - - -
- -
Other posts have asked about the output of qconf -sq all.q...
[root@HEADNODE jobs]# qconf -sq all.q
qname all.q
hostlist @allhosts
seq_no 0
load_thresholds np_load_avg=1.75
suspend_thresholds NONE
nsuspend 1
suspend_interval 00:05:00
priority 0
min_cpu_interval 00:05:00
processors UNDEFINED
qtype BATCH INTERACTIVE
ckpt_list NONE
pe_list make mpi mpich multicore orte
rerun FALSE
slots 1,[compute-0-0.local=16],[compute-0-1.local=16], \
[compute-0-2.local=16],[compute-0-3.local=16], \
[compute-0-4.local=16],[compute-0-6.local=16], \
[compute-0-7.local=16]
tmpdir /tmp
shell /bin/csh
prolog NONE
epilog NONE
shell_start_mode posix_compliant
starter_method NONE
suspend_method NONE
resume_method NONE
terminate_method NONE
notify 00:00:60
owner_list NONE
user_lists NONE
xuser_lists NONE
subordinate_list NONE
complex_values NONE
projects NONE
xprojects NONE
calendar NONE
initial_state default
s_rt INFINITY
h_rt INFINITY
s_cpu INFINITY
h_cpu INFINITY
s_fsize INFINITY
h_fsize INFINITY
s_data INFINITY
h_data INFINITY
s_stack INFINITY
h_stack INFINITY
s_core INFINITY
h_core INFINITY
s_rss INFINITY
h_rss INFINITY
s_vmem INFINITY
h_vmem INFINITY
[root@SUBMITNODE jobs]# qconf -sq all.q
qname all.q
hostlist @allhosts
seq_no 0
load_thresholds np_load_avg=1.75
suspend_thresholds NONE
nsuspend 1
suspend_interval 00:05:00
priority 0
min_cpu_interval 00:05:00
processors UNDEFINED
qtype BATCH INTERACTIVE
ckpt_list NONE
pe_list make
rerun FALSE
slots 1
tmpdir /tmp
shell /bin/csh
prolog NONE
epilog NONE
shell_start_mode posix_compliant
starter_method NONE
suspend_method NONE
resume_method NONE
terminate_method NONE
notify 00:00:60
owner_list NONE
user_lists NONE
xuser_lists NONE
subordinate_list NONE
complex_values NONE
projects NONE
xprojects NONE
calendar NONE
initial_state default
s_rt INFINITY
h_rt INFINITY
s_cpu INFINITY
h_cpu INFINITY
s_fsize INFINITY
h_fsize INFINITY
s_data INFINITY
h_data INFINITY
s_stack INFINITY
h_stack INFINITY
s_core INFINITY
h_core INFINITY
s_rss INFINITY
h_rss INFINITY
s_vmem INFINITY
h_vmem INFINITY
I would like to know how to get qsub working.
Thanks,
-Robert Paul Chase
Channing Labs
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