Not sure that's the problem, William. The masterq-switch is pretty broken in the most versions. Does it work as desired if you specify either of the two variants (without trying to override)? If not then it might simply be the broken masterq switch and you were misled to think it's the command-line overwriting.
Cheers, Fritz Sent from my iPhone Am 21.06.2012 um 11:37 schrieb William Hay <w....@ucl.ac.uk>: > The qsub man page says that command line options can be used to > override options embedded in the script. I just submitted a script > that contained a -masterq option with a different -masterq option on > the command line. Rather than the command line overriding the > embedded option they appear to have been combined and the job appears > to be eligible to run with either masterq. Given that qsub/submit > calls for this to override I'd say this was at least a documentation > bug. Using version 6.2u3 > _______________________________________________ > users mailing list > users@gridengine.org > https://gridengine.org/mailman/listinfo/users _______________________________________________ users mailing list users@gridengine.org https://gridengine.org/mailman/listinfo/users