Fan Dong wrote:
Hope someone can help with this. We submitted hundreds of jobs using
something similiar to qsub -pe my_pe 4 my_job.sh. We found that there
is always a nodes with 8 slots empty at any time that we checked. A
screenshot is pasted here, either comp03 or comp04 is idle while there
are bunch of jobs waiting in the queue. Ideally both comp03 and comp04
should have 2 tasks running all the time. Given our setup we expect 6
jobs running simultaneously but there are only 4 jobs instead. These
are long-run jobs that each of them may last 4 hours so we checked the
queue plenty of times and find this behaviour.
Can someone shed some light on this?
---------------------------------------------------------------------------------
[email protected] BIP 0/4/6 2.45 linux-x64
1344 0.55500 npairs_run anita r 05/27/2013 01:20:46
4
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[email protected] BIP 0/4/6 2.71 linux-x64
1343 0.55500 npairs_run anita r 05/27/2013 00:37:16
4
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[email protected] BIP 0/8/8 5.46 linux-x64
1345 0.55500 npairs_run anita r 05/27/2013 02:17:01
4
1346 0.55500 npairs_run anita r 05/27/2013 03:11:31
4
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[email protected] BIP 0/0/8 0.02 linux-x64
############################################################################
- PENDING JOBS - PENDING JOBS - PENDING JOBS - PENDING JOBS - PENDING JOBS
############################################################################
1347 0.55500 npairs_run anita qw 05/23/2013 16:37:25
4
1348 0.55500 npairs_run anita qw 05/23/2013 16:37:25
4
1349 0.55500 npairs_run anita qw 05/23/2013 16:37:25
4
1350 0.55500 npairs_run anita qw 05/23/2013 16:37:25
4
1351 0.55500 npairs_run anita qw 05/23/2013 16:37:25
4
1352 0.55500 npairs_run anita qw 05/23/2013 16:37:25
4
1353 0.55500 npairs_run anita qw 05/23/2013 16:37:25
4
1354 0.55500 npairs_run anita qw 05/23/2013 16:37:25
4
On 05/17/2013 08:00 AM, [email protected] wrote:
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Today's Topics:
1. Where do the factors for np_load_short come from?
(Tim Landscheidt)
2. Re: Where do the factors for np_load_short come from? (Reuti)
3. Re: Where do the factors for np_load_short come from?
(Tim Landscheidt)
4. Re: Where do the factors for np_load_short come from? (Reuti)
Hi.
'qstat -j id-of-pending-job' should telling you why it doesn't run yet.
Best regards.
Robi
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