On Mon, Sep 23, 2013 at 11:00 AM, Reuti <[email protected]> wrote:
> There is no need to install GridEngine on the new node at all. Usually you
> share /usr/sge or alike and have access to binaries and (more important) the
> shared configuration of the actual used cell (like /usr/sge/default/common)
> so that the execd knowns the actual qmaster which it has to contact.
Well I tried to do an install from my /gridware/sge NFS mount and it
told me that the version of GridEngine which is there was no
compatible with my Ubuntu 13.04 box.
> How is your setup right now and how do the other nodes know about the actual
> qmaster? Are all GridEngine binaries local or already shared?
The are all on /gridware/sge e.g.
[root@solexa4 ~]# ps -ef | grep sge
sgeadmin 4553 1 0 Sep16 ? 00:41:52
/gridware/sge/bin/lx24-amd64/sge_execd
But given the above problem I was going to go with local install. On
Ubuntu there is /etc/default/gridengine and so I set in there :
SGE_ROOT=/gridware/sge
Then I added the execution node on the master and it knows about the
ubuntu machine but cannot talk to it. e.g. it is "solexa1" below.
The other nodes are all my RHEL5 / CentOS5 boxes.
[root@solexa4 ~]# qstat -f
linux26.q@solexa3 BIP 0/0/8 0.00 lx24-amd64
---------------------------------------------------------------------------------
linux26.q@solexa4 BIP 0/0/8 0.00 lx24-amd64
---------------------------------------------------------------------------------
linux26.q@solexa5 BIP 0/0/8 0.03 lx24-amd64
---------------------------------------------------------------------------------
linux26.q@solexa6 BIP 0/0/12 0.04 lx24-amd64
---------------------------------------------------------------------------------
linux38.q@solexa1 BIP 0/0/2 -NA- -NA- au
---------------------------------------------------------------------------------
matlab.q@solexa6 BIP 0/0/12 0.04 lx24-amd64
[root@solexa4 ~]#
--
“Don't eat anything you've ever seen advertised on TV”
- Michael Pollan, author of "In Defense of Food"
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