Hello, First configure PE for smp applications :
qcconf -mp smp pe_name smp slots 9999 user_lists NONE xuser_lists NONE start_proc_args NONE stop_proc_args NONE allocation_rule $pe_slots control_slaves TRUE job_is_first_task FALSE urgency_slots min accounting_summary TRUE qsort_args NONE And than attach this PE to queue (all.q for example): qconf -mq all.q ... ... pe_list smp .. finally submit : qsub -q all.q -pe smp 8 script.sge Regards On Tue, Oct 4, 2016 at 5:33 PM, Lionel SPINELLI <spine...@ciml.univ-mrs.fr> wrote: > Hello all, > > I have a micro grid (4 nodes) and I would like to configure a parallel > environment so that when I launch a job that is multi-threaded (no openmpi > or other, just tools that uses multi thread by their own), all the threads > of the job is going to a single node and will not be dispatched over nodes. > I have tried to use the allocation type with the default "$round_robin", > the jobs seems strangely dispatched. I have tried with $pe_slots but in > that case the job are not dispatched to the nodes and remain in the queue > and with $fill_up, they also seems dispatched... > > I have already configured such kind of mode but I can't remember the exact > properties of my PE to achieve my goal. > > Can someone help me? > > Thanks a lot in advance > > Lionel Spinelli - Ingénieur de recherche en bioinformatique > UMR_S 1090 TAGC et UMR_S 1104 CIML > Aix-Marseille Université - LUMINY - 163 Avenue de Luminy - 13009 Marseille > Tél: +33(0)4 91 82 87 12 (TAGC) / +33(0)4 91 26 91 90 (CIML) > Site : http://www.univ-amu.fr - Email : lionel.spine...@univ-amu.fr > > > _______________________________________________ > users mailing list > users@gridengine.org > https://gridengine.org/mailman/listinfo/users >
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