Unfortunately, I've only seen this mishap once, over several
(multi-hour) runs that get into trouble with memory.


On Wed, Jun 13, 2012 at 8:02 AM, Andy Seaborne <[email protected]> wrote:
> On 12/06/12 18:45, Benson Margulies wrote:
>>
>> I'm using 0.9.0-incubating.
>>
>> 2012-06-12 13:27:49,090 [DefaultMessageListenerContainer-1] ERROR
>> com.basistech.jug.rdfdb.task.RdfdbTaskEndpoint - Failed to \
>> add generate RDF for 9eb8b4cc9bbee1b8f9f1d6895a68b367
>> com.hp.hpl.jena.tdb.TDBException: Different ids for
>> urn:jug:doc#de76105335a9c253f56384e905fd36196: allocated: expected
>> [00000\
>> 00022191FA3], got [000000002215E21F]
>>         at
>> com.hp.hpl.jena.tdb.transaction.NodeTableTrans.inconsistent(NodeTableTrans.java:212)
>>         at
>> com.hp.hpl.jena.tdb.transaction.NodeTableTrans.append(NodeTableTrans.java:200)
>>         at
>> com.hp.hpl.jena.tdb.transaction.NodeTableTrans.writeNodeJournal(NodeTableTrans.java:306)
>>         at
>> com.hp.hpl.jena.tdb.transaction.NodeTableTrans.commitPrepare(NodeTableTrans.java:266)
>>         at
>> com.hp.hpl.jena.tdb.transaction.Transaction.prepare(Transaction.java:131)
>>         at
>> com.hp.hpl.jena.tdb.transaction.Transaction.commit(Transaction.java:112)
>>         at
>> com.hp.hpl.jena.tdb.transaction.DatasetGraphTxn.commit(DatasetGraphTxn.java:40)
>>         at
>> com.hp.hpl.jena.tdb.transaction.DatasetGraphTransaction._commit(DatasetGraphTransaction.java:106)
>>         at
>> com.hp.hpl.jena.tdb.migrate.DatasetGraphTrackActive.commit(DatasetGraphTrackActive.java:60)
>>         at
>> com.hp.hpl.jena.sparql.core.DatasetImpl.commit(DatasetImpl.java:137)
>>         at
>> com.basistech.jug.store.jena.RdfIndexStoreStore.resultsToModel(RdfIndexStoreStore.java:64)
>>         at
>> com.basistech.jug.rdfdb.task.RdfdbTaskEndpoint.assignTask(RdfdbTaskEndpoint.java:129)
>>         at
>> com.basistech.jug.task.TaskEndpointErrorProxy.assignTask(TaskEndpointErrorProxy.java:34)
>>         at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
>>         at
>> sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:39)
>>         at
>> sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25)
>>         at java.lang.reflect.Method.invoke(Method.java:597)
>
>
> This looks like something that has been fixed - bad news is that the DB is
> broken.  Is this deterministically happening or not?
>
> I can't be absolutely positive - there are two symptoms that can occur in
> the node table "inconsistent" and can't rebuild a node.  All errors and bugs
> (cause) result in one of the two symptoms.
>
> If you could try a recent snapshot, that would be great.
>
>        Andy

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