My bad. Missing a “/“ in the file protocol in the locations-mapping.n3 file. We’re all good. Sorry.
> Begin forwarded message: > > From: Grant Pax <[email protected]> > Subject: time out on ontology read > Date: January 2, 2015 at 8:21:49 PM EST > To: [email protected] > > Any ideas why I’d get this? > > OWL ontology: > 141 triples (created with Protege and opens without a hitch) > > source: > > /** > * > */ > package basic; > > import com.hp.hpl.jena.ontology.*; > import com.hp.hpl.jena.rdf.model.*; > > /** > * @author twostewards_fb > * > */ > public class HelloRDFWorld { > > /** > * @param args > */ > public static void main(String[] args) { > OntModel m = > ModelFactory.createOntologyModel(OntModelSpec.OWL_DL_MEM_RULE_INF); > > m.read("http://ontologies.twostewards.com/Stewardship/0.0.15 > <http://ontologies.twostewards.com/Stewardship/0.0.15>"); > > m.write(System.out, "Turtle"); > > } > > } > > Console: > > DEBUG StreamManager - Found: location-mapping.n3 (ClassLoaderLocator) > DEBUG JenaIOEnvironment - Mapping: > http://ontologies.twostewards.com/Stewardship/0.0.15 > <http://ontologies.twostewards.com/Stewardship/0.0.15> => > file://Users/twostewards_fb/Documents/git/ontologies/Stewardship_v0_0_15.ttl > <file://users/twostewards_fb/Documents/git/ontologies/Stewardship_v0_0_15.ttl> > DEBUG FBRuleInfGraph - Adding rule [ (?a rdf:type xsd:integer) -> (?a > rdf:type xsd:decimal) ] > DEBUG FBRuleInfGraph - Adding rule [ (?x owl:intersectionOf ?y) -> (?x > rdf:type owl:Class) ] > DEBUG FBRuleInfGraph - Adding rule [ (?a rdf:type owl:Class) -> (?a rdf:type > rdfs:Resource) ] > DEBUG FBRuleInfGraph - Adding rule [ symmetricProperty1b: (?Y > owl:disjointWith ?X) -> (?X owl:disjointWith ?Y) ] > DEBUG FBRuleInfGraph - Adding rule [ symmetricProperty1b: (?Y > owl:differentFrom ?X) -> (?X owl:differentFrom ?Y) ] > DEBUG FBRuleInfGraph - Adding rule [ (?x owl:incompatibleWith ?y) > notFunctor(?y) -> (?y rdf:type owl:Ontology) ] > DEBUG FBRuleInfGraph - Adding rule [ (?a rdf:type owl:Ontology) -> (?a > rdf:type rdfs:Resource) ] > DEBUG FBRuleInfGraph - Adding rule [ (?x owl:incompatibleWith ?y) -> (?x > rdf:type owl:Ontology) ] > DEBUG FBRuleInfGraph - Adding rule [ (?x owl:backwardCompatibleWith ?y) > notFunctor(?y) -> (?y rdf:type owl:Ontology) ] > DEBUG FBRuleInfGraph - Adding rule [ (?x owl:backwardCompatibleWith ?y) -> > (?x rdf:type owl:Ontology) ] > DEBUG FBRuleInfGraph - Adding rule [ (?x owl:priorVersion ?y) notFunctor(?y) > -> (?y rdf:type owl:Ontology) ] > DEBUG FBRuleInfGraph - Adding rule [ (?x owl:priorVersion ?y) -> (?x rdf:type > owl:Ontology) ] > DEBUG FBRuleInfGraph - Adding rule [ (?x owl:imports ?y) notFunctor(?y) -> > (?y rdf:type owl:Ontology) ] > DEBUG FBRuleInfGraph - Adding rule [ (?x owl:imports ?y) -> (?x rdf:type > owl:Ontology) ] > DEBUG FBRuleInfGraph - Adding rule [ (?a rdf:type owl:OntologyProperty) -> > (?a rdf:type rdf:Property) ] > DEBUG FBRuleInfGraph - Adding rule [ (?x owl:onProperty ?y) notFunctor(?y) -> > (?y rdf:type owl:Property) ] > DEBUG FBRuleInfGraph - Adding rule [ (?a rdf:type owl:Property) -> (?a > rdf:type rdfs:Resource) ] > DEBUG FBRuleInfGraph - Adding rule [ (?x owl:onProperty ?y) -> (?x rdf:type > owl:Restriction) ] > DEBUG FBRuleInfGraph - Adding rule [ (?a rdf:type owl:Restriction) -> (?a > rdf:type rdfs:Resource) ] > DEBUG FBRuleInfGraph - Adding rule [ symmetricProperty1b: (?Y owl:sameAs ?X) > -> (?X owl:sameAs ?Y) ] > DEBUG FBRuleInfGraph - Adding rule [ (?x owl:disjointWith ?y) notFunctor(?y) > -> (?y rdf:type owl:Class) ] > DEBUG FBRuleInfGraph - Adding rule [ (?x owl:disjointWith ?y) -> (?x rdf:type > owl:Class) ] > DEBUG FBRuleInfGraph - Adding rule [ (?x owl:equivalentClass ?y) > notFunctor(?y) -> (?y rdf:type owl:Class) ] > DEBUG FBRuleInfGraph - Adding rule [ (?x owl:equivalentClass ?y) -> (?x > rdf:type owl:Class) ] > DEBUG FBRuleInfGraph - Adding rule [ (?a rdf:type owl:Nothing) -> (?a > rdf:type rdfs:Resource) ] > DEBUG FBRuleInfGraph - Adding rule [ (?a rdf:type owl:Nothing) -> (?a > rdf:type owl:Thing) ] > DEBUG FBRuleInfGraph - Adding rule [ prototype2b: > (-1d1fe0a2:14aad51086e:-7ff0 rdf:type ?d) -> (owl:Thing rdfs:subClassOf ?d) ] > DEBUG FBRuleInfGraph - Adding rule [ (?a rdf:type owl:Thing) -> (?a rdf:type > rdfs:Resource) ] > DEBUG FBRuleInfGraph - Adding rule [ (?a rdf:type owl:Restriction) -> (?a > rdf:type owl:Class) ] > DEBUG FBRuleInfGraph - Adding rule [ (?a rdf:type owl:Class) -> (?a rdf:type > rdfs:Class) ] > DEBUG FBRuleInfGraph - Adding rule [ (?x owl:oneOf ?y) -> (?x rdf:type > owl:Class) ] > DEBUG FBRuleInfGraph - Adding rule [ (?a rdf:type owl:SymmetricProperty) -> > (?a rdf:type owl:ObjectProperty) ] > DEBUG FBRuleInfGraph - Adding rule [ (?a rdf:type owl:TransitiveProperty) -> > (?a rdf:type owl:ObjectProperty) ] > DEBUG FBRuleInfGraph - Adding rule [ (?a rdf:type > owl:InverseFunctionalProperty) -> (?a rdf:type owl:ObjectProperty) ] > DEBUG FBRuleInfGraph - Adding rule [ (?a rdf:type owl:DatatypeProperty) -> > (?a rdf:type rdf:Property) ] > DEBUG FBRuleInfGraph - Adding rule [ (?a rdf:type owl:ObjectProperty) -> (?a > rdf:type rdf:Property) ] > DEBUG FBRuleInfGraph - Adding rule [ (?a rdf:type owl:FunctionalProperty) -> > (?a rdf:type rdf:Property) ] > DEBUG FBRuleInfGraph - Adding rule [ (?a rdf:type rdfs:Datatype) -> (?a > rdf:type rdfs:Class) ] > DEBUG FBRuleInfGraph - Adding rule [ (?a rdfs:isDefinedBy ?b) -> (?a > rdfs:seeAlso ?b) ] > DEBUG FBRuleInfGraph - Adding rule [ (?a rdf:type > rdfs:ContainerMembershipProperty) -> (?a rdf:type rdf:Property) ] > DEBUG FBRuleInfGraph - Adding rule [ (?a rdf:type rdf:Seq) -> (?a rdf:type > rdfs:Container) ] > DEBUG FBRuleInfGraph - Adding rule [ (?a rdf:type rdf:Bag) -> (?a rdf:type > rdfs:Container) ] > DEBUG FBRuleInfGraph - Adding rule [ (?a rdf:type rdf:Alt) -> (?a rdf:type > rdfs:Container) ] > DEBUG FBRuleInfGraph - Adding rule [ (?x rdf:rest ?y) notFunctor(?y) -> (?y > rdf:type rdf:List) ] > DEBUG FBRuleInfGraph - Adding rule [ (?a rdf:type rdf:List) -> (?a rdf:type > rdfs:Resource) ] > DEBUG FBRuleInfGraph - Adding rule [ (?x rdfs:range ?y) notFunctor(?y) -> (?y > rdf:type rdfs:Class) ] > DEBUG FBRuleInfGraph - Adding rule [ (?a rdf:type rdfs:Class) -> (?a rdf:type > rdfs:Resource) ] > DEBUG FBRuleInfGraph - Adding rule [ (?x rdfs:domain ?y) notFunctor(?y) -> > (?y rdf:type rdfs:Class) ] > DEBUG FBRuleInfGraph - Adding rule [ (?x rdfs:subClassOf ?y) notFunctor(?y) > -> (?y rdf:type rdfs:Class) ] > DEBUG FBRuleInfGraph - Adding rule [ (?x rdfs:subPropertyOf ?y) > notFunctor(?y) -> (?y rdf:type rdf:Property) ] > DEBUG FBRuleInfGraph - Adding rule [ (?a rdf:type rdf:Property) -> (?a > rdf:type rdfs:Resource) ] > DEBUG FBRuleInfGraph - Adding rule [ (?x rdf:rest ?y) -> (?x rdf:type > rdf:List) ] > DEBUG FBRuleInfGraph - Adding rule [ (?x rdf:first ?y) -> (?x rdf:type > rdf:List) ] > DEBUG FBRuleInfGraph - Adding rule [ (?x rdf:object ?y) -> (?x rdf:type > rdf:Statement) ] > DEBUG FBRuleInfGraph - Adding rule [ (?x rdf:predicate ?y) -> (?x rdf:type > rdf:Statement) ] > DEBUG FBRuleInfGraph - Adding rule [ (?x rdf:subject ?y) -> (?x rdf:type > rdf:Statement) ] > DEBUG FBRuleInfGraph - Adding rule [ (?x rdfs:range ?y) -> (?x rdf:type > rdf:Property) ] > DEBUG FBRuleInfGraph - Adding rule [ (?x rdfs:domain ?y) -> (?x rdf:type > rdf:Property) ] > DEBUG FBRuleInfGraph - Adding rule [ (?x rdfs:subClassOf ?y) -> (?x rdf:type > rdfs:Class) ] > DEBUG FBRuleInfGraph - Adding rule [ (?x rdfs:subPropertyOf ?y) -> (?x > rdf:type rdf:Property) ] > DEBUG FBRuleInfGraph - Adding rule [ (?a rdf:type rdf:Statement) -> (?a > rdf:type rdfs:Resource) ] > DEBUG FBRuleInfGraph - Adding rule [ (?a rdf:type rdfs:Literal) -> (?a > rdf:type rdfs:Resource) ] > DEBUG FBRuleInfGraph - Adding rule [ (?x rdf:type ?y) notFunctor(?y) -> (?y > rdf:type rdfs:Class) ] > DEBUG FileManager - Add location: LocatorFile > DEBUG FileManager - Add location: LocatorURL > DEBUG FileManager - Add location: ClassLoaderLocator > DEBUG FileManager - Found: ont-policy.rdf (ClassLoaderLocator) > DEBUG StreamManager - Mapped: > http://ontologies.twostewards.com/Stewardship/0.0.15 > <http://ontologies.twostewards.com/Stewardship/0.0.15> => > file://Users/twostewards_fb/Documents/git/ontologies/Stewardship_v0_0_15.ttl > <file://users/twostewards_fb/Documents/git/ontologies/Stewardship_v0_0_15.ttl> > Exception in thread "main" com.hp.hpl.jena.shared.WrappedIOException: > java.net.ConnectException: Operation timed out > at com.hp.hpl.jena.rdf.model.impl.ModelCom.read(ModelCom.java:263) > at > com.hp.hpl.jena.ontology.impl.OntModelImpl.readDelegate(OntModelImpl.java:3109) > at > com.hp.hpl.jena.ontology.impl.OntModelImpl.read(OntModelImpl.java:2206) > at > com.hp.hpl.jena.ontology.impl.OntModelImpl.read(OntModelImpl.java:2122) > at basic.HelloRDFWorld.main(HelloRDFWorld.java:22) > Caused by: java.net.ConnectException: Operation timed out > at java.net.PlainSocketImpl.socketConnect(Native Method) > at > java.net.AbstractPlainSocketImpl.doConnect(AbstractPlainSocketImpl.java:339) > at > java.net.AbstractPlainSocketImpl.connectToAddress(AbstractPlainSocketImpl.java:200) > at > java.net.AbstractPlainSocketImpl.connect(AbstractPlainSocketImpl.java:182) > at java.net.Socket.connect(Socket.java:579) > at java.net.Socket.connect(Socket.java:528) > at sun.net.ftp.impl.FtpClient.doConnect(FtpClient.java:958) > at sun.net.ftp.impl.FtpClient.tryConnect(FtpClient.java:918) > at sun.net.ftp.impl.FtpClient.connect(FtpClient.java:1013) > at sun.net.ftp.impl.FtpClient.connect(FtpClient.java:999) > at > sun.net.www.protocol.ftp.FtpURLConnection.connect(FtpURLConnection.java:294) > at > sun.net.www.protocol.ftp.FtpURLConnection.getInputStream(FtpURLConnection.java:393) > at java.net.URL.openStream(URL.java:1037) > at com.hp.hpl.jena.rdf.model.impl.ModelCom.read(ModelCom.java:260) > ... 4 more >
