Then let me ask a different question-- is there a reason in particular that you 
are using TDB2? TDB1 doesn't have the monotonically-increasing size issue, and 
you could use the well-defined and standardized SPARQL Graph Store protocol [1] 
to insert and delete graphs.

ajs6f

[1] https://www.w3.org/TR/sparql11-http-rdf-update/

> On Nov 11, 2018, at 10:42 AM, Laura Morales <[email protected]> wrote:
> 
>> Is there some reason you don't just copy the graphs into one database?
> 
> Because I need to swap graphs frequently, for example delete Graph1 and 
> insert Graph2. If I put all of them into the same dataset I would have to 
> manage the database size or tdb2.tdbcompact it often since the database only 
> increase in size if I'm right. So, with separate databases, I can just delete 
> the whole folder and replace it with something else.
>  
>  
> 
> Sent: Sunday, November 11, 2018 at 4:32 PM
> From: ajs6f <[email protected]>
> To: [email protected]
> Subject: Re: DatasetTDB2 with separate namedGraphs
> Andy can comment further, but I'm not sure that's possible. Is there some 
> reason you don't just copy the graphs into one database?
> 
> In any event, what you have written down now as assembler RDF shows a 
> tdb2:GraphTDB2 being declared with a tdb2:location and no name. I don't think 
> that's correct. Here is an example that might be more on point:
> 
> https://github.com/apache/jena/blob/master/jena-db/jena-tdb2/testing/Assembler/tdb-named-graph-2.ttl
> 
> ajs6f
> 
>> On Nov 11, 2018, at 10:23 AM, Laura Morales <[email protected]> wrote:
>> 
>> More or less, yes.
>> I want 2 separate TDB2 databases, each one containing 1 graph. And I want a 
>> dataset that is defined by using those graphs from the separate databases. 
>> So, the dataset should have a graph called Graph1 located at ~/graph1 and 
>> another graph called Graph2 located at ~/graph2.
>> Then I'd like to query it like this: SELECT * FROM Graph1...
>> 
>> 
>> 
>> Sent: Sunday, November 11, 2018 at 3:54 PM
>> From: ajs6f <[email protected]>
>> To: [email protected]
>> Subject: Re: DatasetTDB2 with separate namedGraphs
>> I'm not quite sure what you're trying to do here-- are you trying to extract 
>> one named graph from one TDB2 database, another named graph from another 
>> TDB2 database, and present them via Fuseki as a single dataset?
>> 
>> ajs6f
>> 
>>> On Nov 11, 2018, at 9:49 AM, Laura Morales <[email protected]> wrote:
>>> 
>>> Can somebody please help me with configuring an assembler file for 
>>> DatasetTDB2 with multiple namedGraphs in separate files? I have this 
>>> configuration but it doesn't work
>>> 
>>> ======================================================================
>>> PREFIX fuseki: 
>>> <http://jena.apache.org/fuseki#[http://jena.apache.org/fuseki#]>
>>> PREFIX ja: 
>>> <http://jena.hpl.hp.com/2005/11/Assembler#[http://jena.hpl.hp.com/2005/11/Assembler#][http://jena.hpl.hp.com/2005/11/Assembler#[http://jena.hpl.hp.com/2005/11/Assembler#]]>
>>> PREFIX rdf: 
>>> <http://www.w3.org/1999/02/22-rdf-syntax-ns#[http://www.w3.org/1999/02/22-rdf-syntax-ns#][http://www.w3.org/1999/02/22-rdf-syntax-ns#[http://www.w3.org/1999/02/22-rdf-syntax-ns#]]>
>>> PREFIX rdfs: 
>>> <http://www.w3.org/2000/01/rdf-schema#[http://www.w3.org/2000/01/rdf-schema#][http://www.w3.org/2000/01/rdf-schema#[http://www.w3.org/2000/01/rdf-schema#]]>
>>> PREFIX tdb: 
>>> <http://jena.hpl.hp.com/2008/tdb#[http://jena.hpl.hp.com/2008/tdb#][http://jena.hpl.hp.com/2008/tdb#[http://jena.hpl.hp.com/2008/tdb#]]>
>>> PREFIX tdb2: 
>>> <http://jena.apache.org/2016/tdb#[http://jena.apache.org/2016/tdb#][http://jena.apache.org/2016/tdb#[http://jena.apache.org/2016/tdb#]]>
>>> PREFIX text: 
>>> <http://jena.apache.org/text#[http://jena.apache.org/text#][http://jena.apache.org/text#[http://jena.apache.org/text#]]>
>>> 
>>> :dataset a ja:RDFDataset .
>>> 
>>> :dataset ja:namedGraph
>>> [
>>> ja:graphName 
>>> <http://example.org/graph1[http://example.org/graph1][http://example.org/graph1[http://example.org/graph1]]>
>>>  ;
>>> ja:graph
>>> [
>>> a tdb2:GraphTDB2 ;
>>> tdb2:location "/path/to/dataset1/" ;
>>> ]
>>> ] .
>>> 
>>> :dataset ja:namedGraph
>>> [
>>> ja:graphName 
>>> <http://example.org/graph2[http://example.org/graph2][http://example.org/graph2[http://example.org/graph2]]>
>>>  ;
>>> ja:graph
>>> [
>>> a tdb2:GraphTDB2 ;
>>> tdb2:location "/path/to/dataset2/" ;
>>> ]
>>> ] .
>>> ======================================================================
>>> 
>>> I get this error when I try to query it:
>>> 
>>> org.apache.jena.sparql.ARQException: No such type: 
>>> <http://jena.apache.org/2016/tdb#DatasetTDB2[http://jena.apache.org/2016/tdb#DatasetTDB2][http://jena.apache.org/2016/tdb#DatasetTDB2[http://jena.apache.org/2016/tdb#DatasetTDB2]]>
>>> at 
>>> org.apache.jena.sparql.core.assembler.AssemblerUtils.build(AssemblerUtils.java:122)
>>> at tdb2.cmdline.ModTDBDataset.createDataset(ModTDBDataset.java:82)
>>> at arq.cmdline.ModDataset.getDataset(ModDataset.java:36)
>>> at arq.query.getDataset(query.java:176)
>>> at arq.query.queryExec(query.java:213)
>>> at arq.query.exec(query.java:153)
>>> at jena.cmd.CmdMain.mainMethod(CmdMain.java:93)
>>> at jena.cmd.CmdMain.mainRun(CmdMain.java:58)
>>> at jena.cmd.CmdMain.mainRun(CmdMain.java:45)
>>> at tdb2.tdbquery.main(tdbquery.java:30)
>> 
>  

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