Hi Andy, Thanks for your reply but as you can see in the output of maven dependency:tree I only have commons-codec via Jena :
[INFO] [INFO] --- maven-dependency-plugin:3.1.1:tree (default-cli) @ featureofinterest-api --- [INFO] my.application:featureofinterest-api:jar:1.0-SNAPSHOT [INFO] +- my.application:base-rdfizer:jar:1.0-SNAPSHOT:compile [INFO] +- my.application:common:jar:1.0-SNAPSHOT:compile [INFO] | +- commons-fileupload:commons-fileupload:jar:1.4:compile [INFO] | | \- commons-io:commons-io:jar:2.2:compile [INFO] | \- org.springframework.boot:spring-boot-starter-data-jpa:jar:2.2.5.RELEASE:compile [INFO] | +- org.springframework.boot:spring-boot-starter-aop:jar:2.2.5.RELEASE:compile [INFO] | +- org.springframework.boot:spring-boot-starter-jdbc:jar:2.2.5.RELEASE:compile [INFO] | | +- com.zaxxer:HikariCP:jar:3.4.2:compile [INFO] | | \- org.springframework:spring-jdbc:jar:5.2.4.RELEASE:compile [INFO] | +- jakarta.activation:jakarta.activation-api:jar:1.2.2:compile [INFO] | +- jakarta.persistence:jakarta.persistence-api:jar:2.2.3:compile [INFO] | +- jakarta.transaction:jakarta.transaction-api:jar:1.3.3:compile [INFO] | +- org.hibernate:hibernate-core:jar:5.4.12.Final:compile [INFO] | | +- org.jboss.logging:jboss-logging:jar:3.4.1.Final:compile [INFO] | | +- org.javassist:javassist:jar:3.24.0-GA:compile [INFO] | | +- antlr:antlr:jar:2.7.7:compile [INFO] | | +- org.jboss:jandex:jar:2.1.1.Final:compile [INFO] | | +- org.dom4j:dom4j:jar:2.1.1:compile [INFO] | | +- org.hibernate.common:hibernate-commons-annotations:jar:5.1.0.Final:compile [INFO] | | \- org.glassfish.jaxb:jaxb-runtime:jar:2.3.2:compile [INFO] | | +- org.glassfish.jaxb:txw2:jar:2.3.2:compile [INFO] | | +- com.sun.istack:istack-commons-runtime:jar:3.0.8:compile [INFO] | | +- org.jvnet.staxex:stax-ex:jar:1.8.1:compile [INFO] | | \- com.sun.xml.fastinfoset:FastInfoset:jar:1.2.16:compile [INFO] | +- org.springframework.data:spring-data-jpa:jar:2.2.5.RELEASE:compile [INFO] | | +- org.springframework.data:spring-data-commons:jar:2.2.5.RELEASE:compile [INFO] | | \- org.springframework:spring-orm:jar:5.2.4.RELEASE:compile [INFO] | \- org.springframework:spring-aspects:jar:5.2.4.RELEASE:compile [INFO] +- my.application:spring-jena-starter:jar:0.0.1-SNAPSHOT:compile [INFO] | +- org.springframework.boot:spring-boot-starter:jar:2.2.5.RELEASE:compile [INFO] | | +- org.springframework.boot:spring-boot:jar:2.2.5.RELEASE:compile [INFO] | | +- org.springframework.boot:spring-boot-autoconfigure:jar:2.2.5.RELEASE:compile [INFO] | | +- org.springframework.boot:spring-boot-starter-logging:jar:2.2.5.RELEASE:compile [INFO] | | | +- ch.qos.logback:logback-classic:jar:1.2.3:compile [INFO] | | | | \- ch.qos.logback:logback-core:jar:1.2.3:compile [INFO] | | | +- org.apache.logging.log4j:log4j-to-slf4j:jar:2.12.1:compile [INFO] | | | | \- org.apache.logging.log4j:log4j-api:jar:2.12.1:compile [INFO] | | | \- org.slf4j:jul-to-slf4j:jar:1.7.30:compile [INFO] | | +- jakarta.annotation:jakarta.annotation-api:jar:1.3.5:compile [INFO] | | \- org.yaml:snakeyaml:jar:1.25:runtime [INFO] | +- org.apache.jena:apache-jena-libs:pom:3.17.0:compile [INFO] | | +- org.apache.jena:jena-shacl:jar:3.17.0:compile [INFO] | | | \- org.apache.jena:jena-arq:jar:3.17.0:compile [INFO] | | | +- org.apache.jena:jena-core:jar:3.17.0:compile [INFO] | | | | +- org.apache.jena:jena-base:jar:3.17.0:compile [INFO] | | | | | +- org.apache.jena:jena-shaded-guava:jar:3.17.0:compile [INFO] | | | | | +- org.apache.commons:commons-csv:jar:1.8:compile [INFO] | | | | | +- commons-codec:commons-codec:jar:1.13:compile [INFO] | | | | | \- com.github.andrewoma.dexx:collection:jar:0.7:compile [INFO] | | | | +- org.apache.jena:jena-iri:jar:3.17.0:compile [INFO] | | | | \- commons-cli:commons-cli:jar:1.4:compile [INFO] | | | +- org.apache.httpcomponents:httpclient:jar:4.5.11:compile [INFO] | | | | \- org.apache.httpcomponents:httpcore:jar:4.4.13:compile [INFO] | | | +- com.github.jsonld-java:jsonld-java:jar:0.13.2:compile [INFO] | | | +- org.apache.httpcomponents:httpclient-cache:jar:4.5.11:compile [INFO] | | | +- org.apache.thrift:libthrift:jar:0.13.0:compile [INFO] | | | | \- javax.annotation:javax.annotation-api:jar:1.3.2:compile [INFO] | | | \- org.slf4j:jcl-over-slf4j:jar:1.7.30:compile [INFO] | | +- org.apache.jena:jena-tdb:jar:3.17.0:compile [INFO] | | +- org.apache.jena:jena-tdb2:jar:3.17.0:compile [INFO] | | | \- org.apache.jena:jena-dboe-storage:jar:3.17.0:compile [INFO] | | | \- org.apache.jena:jena-dboe-trans-data:jar:3.17.0:compile [INFO] | | | +- org.apache.jena:jena-dboe-transaction:jar:3.17.0:compile [INFO] | | | | \- org.apache.jena:jena-dboe-base:jar:3.17.0:compile [INFO] | | | \- org.apache.jena:jena-dboe-index:jar:3.17.0:compile [INFO] | | \- org.apache.jena:jena-rdfconnection:jar:3.17.0:compile [INFO] | \- org.apache.jena:jena-querybuilder:jar:3.17.0:compile [INFO] +- my.application:model:jar:1.0-SNAPSHOT:compile [INFO] | +- my.application:library-senml:jar:1.0.0-SNAPSHOT:compile [INFO] | +- org.springframework:spring-web:jar:5.2.4.RELEASE:compile [INFO] | | \- org.springframework:spring-beans:jar:5.2.4.RELEASE:compile [INFO] | +- com.fasterxml.jackson.core:jackson-core:jar:2.10.2:compile [INFO] | +- org.apache.velocity:velocity:jar:1.7:compile [INFO] | | +- commons-collections:commons-collections:jar:3.2.1:compile [INFO] | | \- commons-lang:commons-lang:jar:2.4:compile [INFO] | +- commons-logging:commons-logging:jar:1.2:compile [INFO] | \- com.fasterxml.jackson.core:jackson-databind:jar:2.10.2:compile [INFO] +- my.application:bindings:jar:1.0-SNAPSHOT:compile [INFO] | +- my.application:jena-test:jar:1.0-SNAPSHOT:compile [INFO] | | +- org.junit.jupiter:junit-jupiter-params:jar:5.5.2:compile [INFO] | | +- org.junit.jupiter:junit-jupiter-engine:jar:5.5.2:compile [INFO] | | +- org.testcontainers:testcontainers:jar:1.15.1:compile [INFO] | | | +- org.apache.commons:commons-compress:jar:1.20:compile [INFO] | | | +- org.rnorth.duct-tape:duct-tape:jar:1.0.8:compile [INFO] | | | +- org.rnorth.visible-assertions:visible-assertions:jar:2.1.2:compile [INFO] | | | +- com.github.docker-java:docker-java-api:jar:3.2.7:compile [INFO] | | | \- com.github.docker-java:docker-java-transport-zerodep:jar:3.2.7:compile [INFO] | | | \- com.github.docker-java:docker-java-transport:jar:3.2.7:compile [INFO] | | \- org.testcontainers:junit-jupiter:jar:1.15.0:compile [INFO] | +- net.java.dev.jna:jna:jar:4.5.2:compile [INFO] | +- org.springframework.kafka:spring-kafka:jar:2.3.6.RELEASE:compile [INFO] | | +- org.apache.kafka:kafka-clients:jar:2.3.1:compile [INFO] | | | +- com.github.luben:zstd-jni:jar:1.4.0-1:compile [INFO] | | | +- org.lz4:lz4-java:jar:1.6.0:compile [INFO] | | | \- org.xerial.snappy:snappy-java:jar:1.1.7.3:compile [INFO] | | +- org.springframework.retry:spring-retry:jar:1.2.5.RELEASE:compile [INFO] | | +- org.springframework:spring-context:jar:5.2.4.RELEASE:compile [INFO] | | +- org.springframework:spring-messaging:jar:5.2.4.RELEASE:compile [INFO] | | \- org.springframework:spring-tx:jar:5.2.4.RELEASE:compile [INFO] | +- com.bazaarvoice.jolt:jolt-core:jar:0.1.1:compile [INFO] | | \- javax.inject:javax.inject:jar:1:compile [INFO] | \- com.bazaarvoice.jolt:json-utils:jar:0.1.1:compile [INFO] +- org.projectlombok:lombok:jar:1.18.8:provided [INFO] +- com.fasterxml.jackson.core:jackson-annotations:jar:2.9.0:compile [INFO] +- org.apache.commons:commons-lang3:jar:3.9:compile [INFO] +- io.springfox:springfox-swagger-ui:jar:2.9.2:compile [INFO] | \- io.springfox:springfox-spring-web:jar:2.9.2:compile [INFO] +- io.springfox:springfox-swagger2:jar:2.9.2:compile [INFO] | +- io.swagger:swagger-annotations:jar:1.5.20:compile [INFO] | +- io.swagger:swagger-models:jar:1.5.20:compile [INFO] | +- io.springfox:springfox-spi:jar:2.9.2:compile [INFO] | | \- io.springfox:springfox-core:jar:2.9.2:compile [INFO] | +- io.springfox:springfox-schema:jar:2.9.2:compile [INFO] | +- io.springfox:springfox-swagger-common:jar:2.9.2:compile [INFO] | +- com.google.guava:guava:jar:20.0:compile [INFO] | +- com.fasterxml:classmate:jar:1.5.1:compile [INFO] | +- org.slf4j:slf4j-api:jar:1.7.30:compile [INFO] | +- org.springframework.plugin:spring-plugin-core:jar:1.2.0.RELEASE:compile [INFO] | | \- org.springframework:spring-aop:jar:5.2.4.RELEASE:compile [INFO] | +- org.springframework.plugin:spring-plugin-metadata:jar:1.2.0.RELEASE:compile [INFO] | \- org.mapstruct:mapstruct:jar:1.2.0.Final:compile [INFO] +- org.springframework.boot:spring-boot-starter-actuator:jar:2.2.5.RELEASE:compile [INFO] | +- org.springframework.boot:spring-boot-actuator-autoconfigure:jar:2.2.5.RELEASE:compile [INFO] | | +- org.springframework.boot:spring-boot-actuator:jar:2.2.5.RELEASE:compile [INFO] | | \- com.fasterxml.jackson.datatype:jackson-datatype-jsr310:jar:2.10.2:compile [INFO] | \- io.micrometer:micrometer-core:jar:1.3.5:compile [INFO] | +- org.hdrhistogram:HdrHistogram:jar:2.1.11:compile [INFO] | \- org.latencyutils:LatencyUtils:jar:2.0.3:compile [INFO] +- org.aspectj:aspectjweaver:jar:1.9.6:compile [INFO] +- org.springframework.boot:spring-boot-starter-web:jar:2.2.5.RELEASE:compile [INFO] | +- org.springframework.boot:spring-boot-starter-json:jar:2.2.5.RELEASE:compile [INFO] | | +- com.fasterxml.jackson.datatype:jackson-datatype-jdk8:jar:2.10.2:compile [INFO] | | \- com.fasterxml.jackson.module:jackson-module-parameter-names:jar:2.10.2:compile [INFO] | +- org.springframework.boot:spring-boot-starter-tomcat:jar:2.2.5.RELEASE:compile [INFO] | | +- org.apache.tomcat.embed:tomcat-embed-core:jar:9.0.31:compile [INFO] | | +- org.apache.tomcat.embed:tomcat-embed-el:jar:9.0.31:compile [INFO] | | \- org.apache.tomcat.embed:tomcat-embed-websocket:jar:9.0.31:compile [INFO] | +- org.springframework.boot:spring-boot-starter-validation:jar:2.2.5.RELEASE:compile [INFO] | | +- jakarta.validation:jakarta.validation-api:jar:2.0.2:compile [INFO] | | \- org.hibernate.validator:hibernate-validator:jar:6.0.18.Final:compile [INFO] | \- org.springframework:spring-webmvc:jar:5.2.4.RELEASE:compile [INFO] | \- org.springframework:spring-expression:jar:5.2.4.RELEASE:compile [INFO] +- org.springframework.boot:spring-boot-starter-test:jar:2.2.5.RELEASE:test [INFO] | +- org.springframework.boot:spring-boot-test:jar:2.2.5.RELEASE:compile [INFO] | +- org.springframework.boot:spring-boot-test-autoconfigure:jar:2.2.5.RELEASE:test [INFO] | +- com.jayway.jsonpath:json-path:jar:2.4.0:test [INFO] | | \- net.minidev:json-smart:jar:2.3:test [INFO] | | \- net.minidev:accessors-smart:jar:1.2:test [INFO] | | \- org.ow2.asm:asm:jar:5.0.4:test [INFO] | +- jakarta.xml.bind:jakarta.xml.bind-api:jar:2.3.2:compile [INFO] | +- org.junit.jupiter:junit-jupiter:jar:5.5.2:test [INFO] | +- org.junit.vintage:junit-vintage-engine:jar:5.5.2:test [INFO] | | \- org.junit.platform:junit-platform-engine:jar:1.5.2:compile [INFO] | +- org.mockito:mockito-junit-jupiter:jar:3.1.0:test [INFO] | +- org.assertj:assertj-core:jar:3.13.2:test [INFO] | +- org.hamcrest:hamcrest:jar:2.1:compile [INFO] | +- org.mockito:mockito-core:jar:3.1.0:compile [INFO] | | +- net.bytebuddy:byte-buddy:jar:1.10.8:compile [INFO] | | +- net.bytebuddy:byte-buddy-agent:jar:1.10.8:compile [INFO] | | \- org.objenesis:objenesis:jar:2.6:compile [INFO] | +- org.skyscreamer:jsonassert:jar:1.5.0:test [INFO] | | \- com.vaadin.external.google:android-json:jar:0.0.20131108.vaadin1:test [INFO] | +- org.springframework:spring-core:jar:5.2.4.RELEASE:compile [INFO] | | \- org.springframework:spring-jcl:jar:5.2.4.RELEASE:compile [INFO] | +- org.springframework:spring-test:jar:5.2.4.RELEASE:compile [INFO] | \- org.xmlunit:xmlunit-core:jar:2.6.3:test [INFO] +- org.junit.jupiter:junit-jupiter-api:jar:5.5.2:test [INFO] | +- org.apiguardian:apiguardian-api:jar:1.1.0:compile [INFO] | +- org.opentest4j:opentest4j:jar:1.2.0:compile [INFO] | \- org.junit.platform:junit-platform-commons:jar:1.5.2:compile [INFO] +- org.junit.platform:junit-platform-suite-api:jar:1.5.2:test [INFO] \- org.junit.platform:junit-platform-runner:jar:1.5.2:test [INFO] +- junit:junit:jar:4.12:compile [INFO] | \- org.hamcrest:hamcrest-core:jar:2.1:compile [INFO] \- org.junit.platform:junit-platform-launcher:jar:1.5.2:test [INFO] ------------------------------------------------------------------------ [INFO] BUILD SUCCESS [INFO] ------------------------------------------------------------------------ [INFO] Total time: 2.972 s [INFO] Finished at: 2021-01-20T22:21:27+01:00 [INFO] ------------------------------------------------------------------------ Op wo 20 jan. 2021 om 21:50 schreef Andy Seaborne <a...@apache.org>: > Hi Johan, > > https://repo1.maven.org/maven2/org/apache/jena/jena/3.17.0/jena-3.17.0.pom > > Jena uses > > <ver.commons-codec>1.15</ver.commons-codec> > > Something in your application is causing maven to choose 1.13 > It may be a dependency that is "nearer" to your application such as > httpcomponents. > > jena has: > <dependency> > <groupId>org.apache.httpcomponents</groupId> > <artifactId>httpclient</artifactId> > <version>${ver.httpclient}</version> > <exclusions> > <!-- Replace with slf4j adapter --> > <exclusion> > <groupId>commons-logging</groupId> > <artifactId>commons-logging</artifactId> > </exclusion> > <exclusion> > <groupId>commons-codec</groupId> > <artifactId>commons-codec</artifactId> > </exclusion> > </exclusions> > </dependency> > > but if there is another httpcomponents dependency (transitively) then > that may cause maven to pull in 1.13. > > Andy > > On 20/01/2021 20:16, Johan Kumps wrote: > > Hi all, > > > > I'm using version 3.17.0 and get this error: > > > > Caused by: java.lang.NoSuchMethodError: 'long[] > > org.apache.commons.codec.digest.MurmurHash3.hash128x64(byte[])' > > at > > > org.apache.jena.riot.lang.BlankNodeAllocatorHash.alloc(BlankNodeAllocatorHash.java:138) > > at > > > org.apache.jena.riot.lang.BlankNodeAllocatorHash.lambda$alloc$0(BlankNodeAllocatorHash.java:98) > > at > > org.apache.jena.ext.com > .google.common.cache.LocalCache$LocalManualCache$1.load(LocalCache.java:4876) > > at > > org.apache.jena.ext.com > .google.common.cache.LocalCache$LoadingValueReference.loadFuture(LocalCache.java:3529) > > at > > org.apache.jena.ext.com > .google.common.cache.LocalCache$Segment.loadSync(LocalCache.java:2278) > > at > > org.apache.jena.ext.com > .google.common.cache.LocalCache$Segment.lockedGetOrLoad(LocalCache.java:2155) > > at > > org.apache.jena.ext.com > .google.common.cache.LocalCache$Segment.get(LocalCache.java:2045) > > ... 93 common frames omitted > > > > According to https://github.com/OpenRefine/OpenRefine/pull/3379 and > > > https://github.com/OpenRefine/OpenRefine/pull/3379/commits/9b9384aa691d3bb3a8b0a00cae8dc2154a4b51bf > > it > > seems that Commons codec 1.15 is needed from version 3.14+ > > When executing mvn dependency:tree I see that Commons Codec 1.13 is used: > > > > [INFO] | +- org.apache.jena:apache-jena-libs:pom:3.17.0:compile > > [INFO] | | +- org.apache.jena:jena-shacl:jar:3.17.0:compile > > [INFO] | | | \- org.apache.jena:jena-arq:jar:3.17.0:compile > > [INFO] | | | +- org.apache.jena:jena-core:jar:3.17.0:compile > > [INFO] | | | | +- org.apache.jena:jena-base:jar:3.17.0:compile > > [INFO] | | | | | +- > > org.apache.jena:jena-shaded-guava:jar:3.17.0:compile > > [INFO] | | | | | +- > org.apache.commons:commons-csv:jar:1.8:compile > > [INFO] | | | | | +- commons-codec:commons-codec:jar:1.13:compile > > [INFO] | | | | | \- > > com.github.andrewoma.dexx:collection:jar:0.7:compile > > [INFO] | | | | +- org.apache.jena:jena-iri:jar:3.17.0:compile > > [INFO] | | | | \- commons-cli:commons-cli:jar:1.4:compile > > [INFO] | | | +- > > org.apache.httpcomponents:httpclient:jar:4.5.11:compile > > [INFO] | | | | \- > > org.apache.httpcomponents:httpcore:jar:4.4.13:compile > > [INFO] | | | +- > com.github.jsonld-java:jsonld-java:jar:0.13.2:compile > > [INFO] | | | +- > > org.apache.httpcomponents:httpclient-cache:jar:4.5.11:compile > > [INFO] | | | +- org.apache.thrift:libthrift:jar:0.13.0:compile > > [INFO] | | | | \- > > javax.annotation:javax.annotation-api:jar:1.3.2:compile > > [INFO] | | | \- org.slf4j:jcl-over-slf4j:jar:1.7.30:compile > > > > The 3.17.0 version has been downloaded from > > https://repo.maven.apache.org/maven2/org/apache/jena/. > > > > How can I get this fixed? This is heavily blocking me. > > > > Thanks in advance, > > Johan, > > >
