Dr. Yu sent me a version of this intended for OpenMPI back in September. I was just today getting around to trying it, although I noticed that it doesn't work with R v2.6, so my plans just changed a little.
If Dr. Yu gives permission, I'll send to you what he sent to me, or perhaps he'll post it to this list. --andy > -----Original Message----- > From: users-boun...@open-mpi.org > [mailto:users-boun...@open-mpi.org] On Behalf Of Randy Heiland > Sent: Tuesday, December 18, 2007 4:08 PM > To: us...@open-mpi.org > Cc: hpa-ad...@iu.edu > Subject: [OMPI users] Fwd: R npRmpi > > The pkg in question is here: http://www.stats.uwo.ca/faculty/yu/Rmpi/ > > The question is: has anyone on this list got OpenMPI working > for this pkg? Any suggestions? > > thanks, Randy > > > > > Begin forwarded message: > > > > > Subject: R npRmpi > > Been looking into the npRmpi problem > > I can get a segfault executing > > mpi.spawn.Rslaves() > > > The documentation .html files under npRmpi contains the > following: > > "mpi.spawn.Rslaves to spawn R slaves on selected hosts. This is > a LAM-MPI specific function." > > > lamhosts() > > sh: lamnodes: command not found > > The documentation for nearly all mpi.xxx.xxx calls send you to > www.lam-mpi.org for more information. > > Looks for all the world this package depends on LAM-MPI which > is not installed on Quarry. I don't think pointing the build > at an OpenMPI install will help. The .c sources will compile > just fine but when R goes to use them it refers to LAM-MPI > dependent functions and behaves badly. > > > >
