Alessandro Surace wrote: > Hi guys, I try to repost my question... > I've a problem with the last stable build and the last nightly snapshot. > > When I run a job directly with mpirun no problem. > If I try to submit it with lsf: > bsub -a openmpi -m grid01 mpirun.lsf /mnt/ewd/mpi/fibonacci/fibonacci_mpi > > I get the follow error: > mpirun: symbol lookup error: /usr/local/lib/openmpi/mca_plm_lsf.so: > undefined symbol: lsb_init > Job /opt/lsf/7.0/linux2.6-glibc2.3-x86/bin/openmpi_wrapper > /mnt/ewd/mpi/fibonacci/fibonacci_mpi > > I've verified that the lsb_init symbol is present in the library: > [root@grid01 lib]# strings libbat.* |grep lsb_init > lsb_init > sch_lsb_init > lsb_init() > lsb_init > sch_lsb_init > sch_lsb_init > sch_lsb_init > sch_lsb_init > lsb_init() > sch_lsb_init >
Can you verify that LSF is passing your evironment along correctly? It looks like your LD_LIBRARY_PATH is set in your login environment, but not the environment that the LSF job runs in You can check this by submitting a jog that executes just the command 'printenv'. Compare the output to what you get when you type 'printenv' on the command. Compare the values for LD_LIBRARY_PATH, in particular. If that looks okay, then try running a job that just executes ldd /mnt/ewd/mpi/fibonacci/fibonacci_mpi This will show you any libraries that ld can't find in the LSF run-time environment. -- Prentice
